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  1. Synthetic biology approaches can make a significant contribution to the advance of metabolic engineering by reducing the development time of recombinant organisms. However, most of synthetic biology tools have...

    Authors: Pablo Ravasi, Salvador Peiru, Hugo Gramajo and Hugo G Menzella
    Citation: Microbial Cell Factories 2012 11:147
  2. Collagen has proved valuable as biomedical materials for a range of clinical applications, particularly in wound healing. It is normally produced from animal sources, such as from bovines, but concerns have em...

    Authors: Yong Y Peng, Linda Howell, Violet Stoichevska, Jerome A Werkmeister, Geoff J Dumsday and John A M Ramshaw
    Citation: Microbial Cell Factories 2012 11:146
  3. E. coli is a robust host for various genetic manipulations and has been used commonly for bioconversion of hexose and pentose sugars into valuable products. One of the products that E. coli make under fermentativ...

    Authors: Neha Munjal, AnuJose Mattam, Dibyajyoti Pramanik, PremShankar Srivastava and Syed Shams Yazdani
    Citation: Microbial Cell Factories 2012 11:145
  4. High-throughput methods are widely-used for strain screening effectively resulting in binary information regarding high or low productivity. Nevertheless achieving quantitative and scalable parameters for fast...

    Authors: Peter Rohe, Deepak Venkanna, Britta Kleine, Roland Freudl and Marco Oldiges
    Citation: Microbial Cell Factories 2012 11:144
  5. Bacillus subtilis is a very important Gram-positive model organism of high biotechnological relevance, which is widely used as a host for the production of both secreted and cytoplasmic proteins. We developed a n...

    Authors: Anna A Toymentseva, Karen Schrecke, Margarita R Sharipova and Thorsten Mascher
    Citation: Microbial Cell Factories 2012 11:143
  6. Over the past decades, nitrilases have drawn considerable attention because of their application in nitrile degradation as prominent biocatalysts. Nitrilases are derived from bacteria, filamentous fungi, yeast...

    Authors: Jin-Song Gong, Zhen-Ming Lu, Heng Li, Jin-Song Shi, Zhe-Min Zhou and Zheng-Hong Xu
    Citation: Microbial Cell Factories 2012 11:142
  7. Lactic acid bacteria (LAB) play an important role in agricultural as well as industrial biotechnology. Development of improved LAB strains using e.g. library approaches is often limited by low transformation e...

    Authors: Katharina Spath, Stefan Heinl and Reingard Grabherr
    Citation: Microbial Cell Factories 2012 11:141
  8. Penicillium chrysogenum, the main production strain for penicillin-G, has a high content of intracellular carbohydrates, especially reduced sugars such as mannitol, arabitol, erythritol, as well as trehalose and ...

    Authors: Zheng Zhao, Angela ten Pierick, Lodewijk de Jonge, Joseph J Heijnen and S Aljoscha Wahl
    Citation: Microbial Cell Factories 2012 11:140
  9. In nature, mussel adhesive proteins (MAPs) show remarkable adhesive properties, biocompatibility, and biodegradability. Thus, they have been considered promising adhesive biomaterials for various biomedical an...

    Authors: Yoo Seong Choi, Yun Jung Yang, Byeongseon Yang and Hyung Joon Cha
    Citation: Microbial Cell Factories 2012 11:139
  10. Purine nucleotides exhibit various functions in cellular metabolism. Besides serving as building blocks for nucleic acid synthesis, they participate in signaling pathways and energy metabolism. Further, IMP an...

    Authors: Susanne Peifer, Tobias Barduhn, Sarah Zimmet, Dietrich A Volmer, Elmar Heinzle and Konstantin Schneider
    Citation: Microbial Cell Factories 2012 11:138
  11. Lactobacillus plantarum is commonly used in industrial fermentation processes. Selected strains are also marketed as probiotics for their health beneficial effects. Although the functional role of peptidoglycan-d...

    Authors: Thomas Rolain, Elvis Bernard, Pascal Courtin, Peter A Bron, Michiel Kleerebezem, Marie-Pierre Chapot-Chartier and Pascal Hols
    Citation: Microbial Cell Factories 2012 11:137
  12. Scheffersomyces stipitis is a Crabtree negative yeast, commonly known for its capacity to ferment pentose sugars. Differently from Crabtree positive yeasts such as Saccharomyces cerevisiae, the onset of fermentat...

    Authors: Marta Papini, Intawat Nookaew, Mathias Uhlén and Jens Nielsen
    Citation: Microbial Cell Factories 2012 11:136
  13. Polyoxins are potent inhibitors of chitin synthetases in fungi and insects. The gene cluster responsible for biosynthesis of polyoxins has been cloned and sequenced from Streptomyces cacaoi and tens of polyoxin a...

    Authors: Jine Li, Lei Li, Chi Feng, Yihua Chen and Huarong Tan
    Citation: Microbial Cell Factories 2012 11:135
  14. Trichoderma reesei is a soft rot Ascomycota fungus utilised for industrial production of secreted enzymes, especially lignocellulose degrading enzymes. About 30 carbohydrate active enzymes (CAZymes) of T. reesei ...

    Authors: Mari Häkkinen, Mikko Arvas, Merja Oja, Nina Aro, Merja Penttilä, Markku Saloheimo and Tiina M Pakula
    Citation: Microbial Cell Factories 2012 11:134
  15. The XylS/Pm expression system has been used to produce recombinant proteins at industrial levels in Escherichia coli. Activation of transcription from the Pm promoter takes place in the presence of benzoic acid o...

    Authors: Friederike Zwick, Rahmi Lale and Svein Valla
    Citation: Microbial Cell Factories 2012 11:133
  16. Plasmid DNA (pDNA) is a promising molecule for therapeutic applications. pDNA is produced by Escherichia coli in high cell-density cultivations (HCDC) using fed-batch mode. The typical limitations of such cultiva...

    Authors: Gheorghe M Borja, Eugenio Meza Mora, Blanca Barrón, Guillermo Gosset, Octavio T Ramírez and Alvaro R Lara
    Citation: Microbial Cell Factories 2012 11:132
  17. Pyruvate-decarboxylase negative (Pdc-) strains of Saccharomyces cerevisiae combine the robustness and high glycolytic capacity of this yeast with the absence of alcoholic fermentation. This makes Pdc-S. cerevisia...

    Authors: Bart Oud, Carmen-Lisset Flores, Carlos Gancedo, Xiuying Zhang, Joshua Trueheart, Jean-Marc Daran, Jack T Pronk and Antonius JA van Maris
    Citation: Microbial Cell Factories 2012 11:131
  18. Microbial polyhydroxyalkanoates (PHA) are biopolyesters consisting of diverse monomers. PHA synthase PhaC2Ps cloned from Pseudomonas stutzeri 1317 is able to polymerize short-chain-length (scl) 3-hydroxybutyrate ...

    Authors: Xue Gao, Xiao-Xi Yuan, Zhen-Yu Shi, Ying-Ying Guo, Xiao-Wen Shen, Jin-Chun Chen, Qiong Wu and Guo-Qiang Chen
    Citation: Microbial Cell Factories 2012 11:130
  19. Buffering to achieve pH control is crucial for successful trichloroethene (TCE) anaerobic bioremediation. Bicarbonate (HCO3) is the natural buffer in groundwater and the buffer of choice in the laboratory and at...

    Authors: Anca G Delgado, Prathap Parameswaran, Devyn Fajardo-Williams, Rolf U Halden and Rosa Krajmalnik-Brown
    Citation: Microbial Cell Factories 2012 11:128
  20. In Escherichia coli phosphoenolpyruvate (PEP) is a key central metabolism intermediate that participates in glucose transport, as precursor in several biosynthetic pathways and it is involved in allosteric regula...

    Authors: Eugenio Meza, Judith Becker, Francisco Bolivar, Guillermo Gosset and Christoph Wittmann
    Citation: Microbial Cell Factories 2012 11:127
  21. The synthesis of cellulose is among the most important but poorly understood biochemical processes, especially in bacteria, due to its complexity and high degree of regulation. In this study, we analyzed both ...

    Authors: M Robledo, L Rivera, Jose I Jiménez-Zurdo, R Rivas, F Dazzo, E Velázquez, E Martínez-Molina, Ann M Hirsch and Pedro F Mateos
    Citation: Microbial Cell Factories 2012 11:125
  22. The budding yeast Saccharomyces cerevisiae supports replication of many different RNA or DNA viruses (e.g. Tombusviruses or Papillomaviruses) and has provided means for up-scalable, cost- and time-effective produ...

    Authors: Ana Backovic, Tiziana Cervelli, Alessandra Salvetti, Lorena Zentilin, Mauro Giacca and Alvaro Galli
    Citation: Microbial Cell Factories 2012 11:124
  23. Specific strains of Lactobacillus plantarum are marketed as health-promoting probiotics. The role and interplay of cell-wall compounds like wall- and lipo-teichoic acids (WTA and LTA) in bacterial physiology and ...

    Authors: Peter A Bron, Satoru Tomita, Iris I van Swam, Daniela M Remus, Marjolein Meijerink, Michiel Wels, Sanae Okada, Jerry M Wells and Michiel Kleerebezem
    Citation: Microbial Cell Factories 2012 11:123
  24. Overflow metabolism is well known for yeast, bacteria and mammalian cells. It typically occurs under glucose excess conditions and is characterized by excretions of by-products such as ethanol, acetate or lact...

    Authors: Nicole Paczia, Anke Nilgen, Tobias Lehmann, Jochem Gätgens, Wolfgang Wiechert and Stephan Noack
    Citation: Microbial Cell Factories 2012 11:122
  25. The rumen is one of the most complicated and most fascinating microbial ecosystems in nature. A wide variety of microbial species, including bacteria, fungi and protozoa act together to bioconvert (ligno)cellu...

    Authors: Michael Sauer, Hans Marx and Diethard Mattanovich
    Citation: Microbial Cell Factories 2012 11:121
  26. The integration of biotechnology into chemical manufacturing has been recognized as a key technology to build a sustainable society. However, the practical applications of biocatalytic chemical conversions are...

    Authors: Xiaoting Ye, Kohsuke Honda, Takaaki Sakai, Kenji Okano, Takeshi Omasa, Ryuichi Hirota, Akio Kuroda and Hisao Ohtake
    Citation: Microbial Cell Factories 2012 11:120
  27. The bacterium Acetobacter sp. CCTCC M209061 is a promising whole-cell biocatalyst with exclusive anti-Prelog stereoselectivity for the reduction of prochiral ketones that can be used to make valuable chiral alcoh...

    Authors: Xiao-Hong Chen, Xiao-Ting Wang, Wen-Yong Lou, Ying Li, Hong Wu, Min-Hua Zong, Thomas J Smith and Xin-De Chen
    Citation: Microbial Cell Factories 2012 11:119
  28. The discovery of the autotransporter family has provided a mechanism for surface expression of proteins in laboratory strains of Escherichia coli. We have previously reported the use of the AIDA-I autotransport s...

    Authors: Johan Jarmander, Martin Gustavsson, Thi-Huyen Do, Patrik Samuelson and Gen Larsson
    Citation: Microbial Cell Factories 2012 11:118
  29. Sesquiterpenes are a class of natural products with a diverse range of attractive industrial proprieties. Due to economic difficulties of sesquiterpene production via extraction from plants or chemical synthes...

    Authors: Gionata Scalcinati, Siavash Partow, Verena Siewers, Michel Schalk, Laurent Daviet and Jens Nielsen
    Citation: Microbial Cell Factories 2012 11:117
  30. The surface properties of probiotic bacteria influence to a large extent their interactions within the gut ecosystem. There is limited amount of information on the effect of the production process on the surfa...

    Authors: Gurjot Deepika, Esther Karunakaran, Claire R Hurley, Catherine A Biggs and Dimitris Charalampopoulos
    Citation: Microbial Cell Factories 2012 11:116
  31. Lactic acid bacteria (LAB) have taken centre stage in perspectives of modern fermented food industry and probiotic based therapeutics. These bacteria encounter various stress conditions during industrial proce...

    Authors: Sarang Dilip Pophaly, Rameshwar Singh, Saurabh Dilip Pophaly, Jai K Kaushik and Sudhir Kumar Tomar
    Citation: Microbial Cell Factories 2012 11:114
  32. D-Tagatose is a natural monosaccharide which can be used as a low-calorie sugar substitute in food, beverages and pharmaceutical products. It is also currently being tested as an anti-diabetic and obesity cont...

    Authors: Marta Wanarska and Józef Kur
    Citation: Microbial Cell Factories 2012 11:113
  33. The Crabtree-negative yeast species Kluyveromyces lactis has been established as an attractive microbial expression system for recombinant proteins at industrial scale. Its LAC genes allow for utilization of the ...

    Authors: Jorrit-Jan Krijger, Jan Baumann, Melanie Wagner, Katja Schulze, Christian Reinsch, Thomas Klose, Osita F Onuma, Claudia Simon, Sven-Erik Behrens and Karin D Breunig
    Citation: Microbial Cell Factories 2012 11:112
  34. The most widespread, efficient prokaryotic protein-producing system is one where the T7 phage polymerase recognizes the T7 phage promoter (T7 p/p system). Unfortunately, in this system, target protein expressi...

    Authors: Malgorzata Kesik-Brodacka, Agnieszka Romanik, Diana Mikiewicz-Sygula, Grazyna Plucienniczak and Andrzej Plucienniczak
    Citation: Microbial Cell Factories 2012 11:109
  35. Biocatalytic asymmetric reductions with whole cells can offer high enantioselectivity, environmentally benign processes and energy-effective operations and thus are of great interest. The application of whole ...

    Authors: Bo-Bo Zhang, Jing Cheng, Wen-Yong Lou, Pan Wang and Min-Hua Zong
    Citation: Microbial Cell Factories 2012 11:108
  36. Yarrowia lipolytica efficiently metabolizes and assimilates hydrophobic compounds such as n-alkanes and fatty acids. Efficient substrate uptake is enabled by naturally secreted emulsifiers and a modified cell sur...

    Authors: Andreas Braun, Martina Geier, Bruno Bühler, Andreas Schmid, Stephan Mauersberger and Anton Glieder
    Citation: Microbial Cell Factories 2012 11:106
  37. Penicillin acylases (PACs) are enzymes of industrial relevance in the manufacture of β-lactam antibiotics. Development of a PAC with a longer half-life under the reaction conditions used is essential for the i...

    Authors: Leticia L Torres, Eloy R Ferreras, Ángel Cantero, Aurelio Hidalgo and José Berenguer
    Citation: Microbial Cell Factories 2012 11:105
  38. Viability in a non dividing state is referred to as chronological life span (CLS). Most grape juice fermentation happens when Saccharomyces cerevisiae yeast cells have stopped dividing; therefore, CLS is an impor...

    Authors: Helena Orozco, Emilia Matallana and Agustín Aranda
    Citation: Microbial Cell Factories 2012 11:104
  39. Pichia pastoris is an established eukaryotic host for the production of recombinant proteins. Most often, protein production is under the control of the strong methanol-inducible aox1 promoter. However, detailed ...

    Authors: AnaLeticia Vanz, Heinrich Lünsdorf, Ahmad Adnan, Manfred Nimtz, Chandrasekhar Gurramkonda, Navin Khanna and Ursula Rinas
    Citation: Microbial Cell Factories 2012 11:103
  40. Lipase from Rhizopus chinensis is a versatile biocatalyst for various bioconversions and has been expressed at high-level in Pichia pastoris. However, the use of R. chinensis lipase in industrial applications is ...

    Authors: Xiao-Wei Yu, Rui Wang, Meng Zhang, Yan Xu and Rong Xiao
    Citation: Microbial Cell Factories 2012 11:102
  41. Isobutanol is considered as a leading candidate for the replacement of current fossil fuels, and expected to be produced biotechnologically. Owing to the valuable features, Bacillus subtilis has been engineered a...

    Authors: Shanshan Li, Di Huang, Yong Li, Jianping Wen and Xiaoqiang Jia
    Citation: Microbial Cell Factories 2012 11:101
  42. The Bacillus subtilis spore has long been used as a surface display system with potential applications in a variety of fields ranging from mucosal vaccine delivery, bioremediation and biocatalyst development. Mor...

    Authors: Teja Sirec, Andrea Strazzulli, Rachele Isticato, Maurilio De Felice, Marco Moracci and Ezio Ricca
    Citation: Microbial Cell Factories 2012 11:100
  43. The expression and activity of the different Saccharomyces cerevisiae hexose uptake systems (Hxt) and the kinetics of glucose uptake are considered essential to industrial alcoholic fermentation performance. Howe...

    Authors: Margarida Palma, Sara Cordeiro Madeira, Ana Mendes-Ferreira and Isabel Sá-Correia
    Citation: Microbial Cell Factories 2012 11:99
  44. The understanding of the molecular basis of yeast tolerance to ethanol may guide the design of rational strategies to increase process performance in industrial alcoholic fermentations. A set of 21 genes encod...

    Authors: Miguel C Teixeira, Cláudia P Godinho, Tânia R Cabrito, Nuno P Mira and Isabel Sá-Correia
    Citation: Microbial Cell Factories 2012 11:98

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