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  1. The yeast Saccharomyces cerevisiae provides intriguing possibilities for synthetic biology and bioprocess applications, but its use is still constrained by cellular characteristics that limit the product yields. ...

    Authors: Jorg C. de Ruijter, Essi V. Koskela and Alexander D. Frey
    Citation: Microbial Cell Factories 2016 15:87
  2. De novo production of multi-hydroxylated diterpenoids is challenging due to the lack of efficient redox systems.

    Authors: Christian Görner, Patrick Schrepfer, Veronika Redai, Frank Wallrapp, Bernhard Loll, Wolfgang Eisenreich, Martin Haslbeck and Thomas Brück
    Citation: Microbial Cell Factories 2016 15:86
  3. Streptomyces venezuelae ATCC 10712 produces antibiotics chloramphenicol (Cml) and jadomycin (Jad) in response to nutrient limitation and ethanol shock (ES), respectively. Biosynthesis ...

    Authors: Olga N. Sekurova, Jianhai Zhang, KÃ¥re A. Kristiansen and Sergey B. Zotchev
    Citation: Microbial Cell Factories 2016 15:85
  4. The classic AOX1 replacement approach is still one of the most often used techniques for expression of recombinant proteins in the methylotrophic yeast Pichia pastoris. Although this approach is largely successfu...

    Authors: Jan-Philipp Schwarzhans, Daniel Wibberg, Anika Winkler, Tobias Luttermann, Jörn Kalinowski and Karl Friehs
    Citation: Microbial Cell Factories 2016 15:84
  5. Corynebacterium pseudotuberculosis, a facultative intracellular bacterial pathogen, is the etiological agent of caseous lymphadenitis (CLA), an infectious disease that affects sheep an...

    Authors: Karina T. O. Santana-Jorge, Túlio M. Santos, Natayme R. Tartaglia, Edgar L. Aguiar, Renata F. S. Souza, Ricardo B. Mariutti, Raphael J. Eberle, Raghuvir K. Arni, Ricardo W. Portela, Roberto Meyer and Vasco Azevedo
    Citation: Microbial Cell Factories 2016 15:83
  6. The process of industrial xylitol production is a massive source of organic pollutants, such as waste xylose mother liquor (WXML), a viscous reddish-brown liquid. Currently, WXML is difficult to reuse due to i...

    Authors: Hengwei Wang, Lijuan Li, Lebin Zhang, Jin An, Hairong Cheng and Zixin Deng
    Citation: Microbial Cell Factories 2016 15:82
  7. Heterologous production of hydrolytic enzymes is important for green and white biotechnology since these enzymes serve as efficient biocatalysts for the conversion of a wide variety of raw materials into value...

    Authors: Suttipong Sak-Ubol, Peenida Namvijitr, Phornsiri Pechsrichuang, Dietmar Haltrich, Thu-Ha Nguyen, Geir Mathiesen, Vincent G. H. Eijsink and Montarop Yamabhai
    Citation: Microbial Cell Factories 2016 15:81
  8. Purified from the supernatant of Bacillus subtilis QK02 culture broth, Subtilisin QK-2 is a type of effective thrombolytic reagent that has great exploitable potential. However, the unbearable flavor that occurs ...

    Authors: Ruifeng Mao, Kangping Zhou, Zhenwei Han and Yefu Wang
    Citation: Microbial Cell Factories 2016 15:80
  9. Pinoresinol is a high-value plant-derived lignan with multiple health supporting effects. Enantiomerically pure pinoresinol can be isolated from natural sources, but with low efficiency. Most chemical and bioc...

    Authors: Esther Ricklefs, Marco Girhard and Vlada B. Urlacher
    Citation: Microbial Cell Factories 2016 15:78
  10. Sansanmycins are uridyl peptide antibiotics (UPAs), which are inhibitors of translocase I (MraY) and block the bacterial cell wall biosynthesis. They have good antibacterial activity against Pseudomonas aeruginos...

    Authors: Yuanyuan Shi, Zhibo Jiang, Xuan Lei, Ningning Zhang, Qiang Cai, Qinglian Li, Lifei Wang, Shuyi Si, Yunying Xie and Bin Hong
    Citation: Microbial Cell Factories 2016 15:77
  11. Fluorescent nanoparticles or quantum dots (QDs) have been intensely studied for basic and applied research due to their unique size-dependent properties. There is an increasing interest in developing ecofriend...

    Authors: D. O. Plaza, C. Gallardo, Y. D. Straub, D. Bravo and J. M. Pérez-Donoso
    Citation: Microbial Cell Factories 2016 15:76
  12. Microbial lipids can represent a valuable alternative feedstock for biodiesel production in the context of a viable bio-based economy. This production can be driven by cultivating some oleaginous microorganism...

    Authors: Lorenzo Signori, Diletta Ami, Riccardo Posteri, Andrea Giuzzi, Paolo Mereghetti, Danilo Porro and Paola Branduardi
    Citation: Microbial Cell Factories 2016 15:75
  13. Given its high surplus and low cost, glycerol has emerged as interesting carbon substrate for the synthesis of value-added chemicals. The soil bacterium Pseudomonas putida KT2440 can use glycerol to synthesize me...

    Authors: Veronique Beckers, Ignacio Poblete-Castro, Jürgen Tomasch and Christoph Wittmann
    Citation: Microbial Cell Factories 2016 15:73
  14. Among the oligosaccharides that may positively affect the gut microbiota, xylo-oligosaccharides (XOS) and arabinoxylan oligosaccharides (AXOS) possess promising functional properties. Ingestion of XOS has been...

    Authors: Erica Pontonio, Jennifer Mahony, Raffaella Di Cagno, Mary O’Connell Motherway, Gabriele Andrea Lugli, Amy O’Callaghan, Maria De Angelis, Marco Ventura, Marco Gobbetti and Douwe van Sinderen
    Citation: Microbial Cell Factories 2016 15:72
  15. Bacterial surface display is an attractive technique for the production of cell-anchored, functional proteins and engineering of whole-cell catalysts. Although various outer membrane proteins have been used fo...

    Authors: Sofie Wendel, Emil C. Fischer, Virginia Martínez, Susanna Seppälä and Morten H. H. Nørholm
    Citation: Microbial Cell Factories 2016 15:71
  16. Lactic acid bacteria (LAB) are promising vectors of choice to deliver active molecules to mucosal tissues. They are recognized as safe by the World Health Organization and some strains have probiotic propertie...

    Authors: C. Michon, P. Langella, V. G. H. Eijsink, G. Mathiesen and J. M. Chatel
    Citation: Microbial Cell Factories 2016 15:70
  17. The Gram-positive bacterium Bacillus subtilis has been widely used as a cell factory for the production of proteins due to its generally regarded as safe (GRAS) nature and secretion capability. Of the known secre...

    Authors: Jingqi Chen, Liuqun Zhao, Gang Fu, Wenjuan Zhou, Yuanxia Sun, Ping Zheng, Jibin Sun and Dawei Zhang
    Citation: Microbial Cell Factories 2016 15:69
  18. The filamentous fungus Aspergillus niger is widely exploited as an important expression host for industrial production. The glucoamylase high-producing strain A. niger CICC2462 has been used as a host strain for...

    Authors: Hui Zhang, Shuang Wang, Xiang xiang Zhang, Wei Ji, Fuping Song, Yue Zhao and Jie Li
    Citation: Microbial Cell Factories 2016 15:68
  19. Acetic acid, an inhibitor of sugar fermentation by yeast, is invariably present in lignocellulosic hydrolysates which are used or considered as feedstocks for yeast-based bioethanol production. Saccharomyces cere...

    Authors: Ioannis Papapetridis, Marlous van Dijk, Arthur PA Dobbe, Benjamin Metz, Jack T. Pronk and Antonius J. A. van Maris
    Citation: Microbial Cell Factories 2016 15:67
  20. Bacillus subtilis, a Gram-positive organism, has been developed to be an attractive expression platform to produce both secreted and cytoplasmic proteins owing to its prominent biologi...

    Authors: Chengran Guan, Wenjing Cui, Jintao Cheng, Li Zhou, Zhongmei Liu and Zhemin Zhou
    Citation: Microbial Cell Factories 2016 15:66
  21. Anaerobic digesters become unstable when operated at a high organi c loading rate (OLR). Investigating the microbial community response to OLR disturbance is helpful for achieving efficient and stable process ...

    Authors: Lei Li, Qin He, Yao Ma, Xiaoming Wang and Xuya Peng
    Citation: Microbial Cell Factories 2016 15:65
  22. Understanding the metabolic mechanism of sterols to produce valuable steroid intermediates in mycobacterium by a noncoding small RNA (sRNA) view is still limited. In the work, RNA-seq was implemented to invest...

    Authors: Min Liu, Zhan-Tao Zhu, Xin-Yi Tao, Feng-Qing Wang and Dong-Zhi Wei
    Citation: Microbial Cell Factories 2016 15:64
  23. Inducible expression systems are frequently used for the production of heterologous proteins. Achieving maximum product concentrations requires induction profiling, namely the optimization of induction time an...

    Authors: Georg Wandrey, Claus Bier, Dennis Binder, Kyra Hoffmann, Karl-Erich Jaeger, Jörg Pietruszka, Thomas Drepper and Jochen Büchs
    Citation: Microbial Cell Factories 2016 15:63
  24. Hepatitis C virus (HCV) infection is a major health problem worldwide, affecting an estimated 2–3 % of human population. An HCV vaccine, however, remains unavailable. High viral diversity poses a challenge in ...

    Authors: Anna Czarnota, Jolanta Tyborowska, Grażyna Peszyńska-Sularz, Beata Gromadzka, Krystyna Bieńkowska-Szewczyk and Katarzyna Grzyb
    Citation: Microbial Cell Factories 2016 15:62
  25. Vanillin is an industrially valuable molecule that can be produced from simple carbon sources in engineered microorganisms such as Saccharomyces cerevisiae and Escherichia coli. In E. coli, de novo production of ...

    Authors: Aditya M. Kunjapur, Jason C. Hyun and Kristala L. J. Prather
    Citation: Microbial Cell Factories 2016 15:61
  26. Erythritol is a polyol that is used in the food and beverage industry. Due to its non-caloric and non-cariogenic properties, the popularity of this sweetener is increasing. Large scale production of erythritol...

    Authors: Aniek D. van der Woude, Ruth Perez Gallego, Angie Vreugdenhil, Vinod Puthan Veetil, Tania Chroumpi and Klaas J. Hellingwerf
    Citation: Microbial Cell Factories 2016 15:60
  27. Production of recombinant drugs in process-friendly endotoxin-free bacterial factories targets to a lessened complexity of the purification process combined with minimized biological hazards during product app...

    Authors: Fabián Rueda, María Virtudes Céspedes, Alejandro Sánchez-Chardi, Joaquin Seras-Franzoso, Mireia Pesarrodona, Neus Ferrer-Miralles, Esther Vázquez, Ursula Rinas, Ugutz Unzueta, Uwe Mamat, Ramón Mangues, Elena García-Fruitós and Antonio Villaverde
    Citation: Microbial Cell Factories 2016 15:59
  28. Trehalose is related to several types of stress responses, especially freezing response in baker’s yeast (Saccharomyces cerevisiae). It is desirable to manipulate trehalose-related genes to create yeast strains t...

    Authors: Xi Sun, Cui-Ying Zhang, Ming-Yue Wu, Zhi-Hua Fan, Shan-Na Liu, Wen-Bi Zhu and Dong-Guang Xiao
    Citation: Microbial Cell Factories 2016 15:54
  29. Bacillus subtilis is an important cell factory for the biotechnological industry due to its ability to secrete commercially relevant proteins in large amounts directly into the growth ...

    Authors: Tina N. Ploss, Ewoud Reilman, Carmine G. Monteferrante, Emma L. Denham, Sjouke Piersma, Anja Lingner, Jari Vehmaanperä, Patrick Lorenz and Jan Maarten van Dijl
    Citation: Microbial Cell Factories 2016 15:57
  30. Streptomyces albus J1074 produces glycosylated antibiotics paulomycin A, B and E that derive from chorismate and contain an isothiocyanate residue in form of paulic acid. Paulomycins b...

    Authors: Aránzazu González, Miriam Rodríguez, Alfredo F. Braña, Carmen Méndez, José A. Salas and Carlos Olano
    Citation: Microbial Cell Factories 2016 15:56
  31. Our study aimed to search for novel bacteria capable of producing polyhydroxyalkanoates (PHAs) using crude glycerol residue obtained from biodiesel production in which used cooking oils were the substrates.

    Authors: Amtiga Muangwong, Thanawat Boontip, Jittakan Pachimsawat and Suchada Chanprateep Napathorn
    Citation: Microbial Cell Factories 2016 15:55
  32. In the future, oil- and gas-derived polymers may be replaced with bio-based polymers, produced from renewable feedstocks using engineered cell factories. Acrylic acid and acrylic esters with an estimated world...

    Authors: Kanchana R. Kildegaard, Niels B. Jensen, Konstantin Schneider, Eik Czarnotta, Emre Özdemir, Tobias Klein, Jérôme Maury, Birgitta E. Ebert, Hanne B. Christensen, Yun Chen, Il-Kwon Kim, Markus J. Herrgård, Lars M. Blank, Jochen Forster, Jens Nielsen and Irina Borodina
    Citation: Microbial Cell Factories 2016 15:53
  33. Intracellular metabolism of glucocorticoid hormones plays an important role in the pathogenesis of metabolic syndrome and regulates, among many physiological processes, collagen metabolism in skin. At the peri...

    Authors: Rosario Vanella, Roberta Callari, Anna Weston, Harald Heider, Markus S. Schwab and Eric Kübler
    Citation: Microbial Cell Factories 2016 15:52
  34. The yeast amino acid catabolism plays an important role in flavour generation since higher alcohols and acetate esters, amino acid catabolism end products, are key components of overall flavour and aroma in fe...

    Authors: Jiri Stribny, Gabriele Romagnoli, Roberto Pérez-Torrado, Jean-Marc Daran and Amparo Querol
    Citation: Microbial Cell Factories 2016 15:51
  35. Engineering lactic acid bacteria (LAB) is of growing importance for food and feed industry as well as for in vivo vaccination or the production of recombinant proteins in food grade organisms. Often, expressio...

    Authors: Silvia Heiss, Angelika Hörmann, Christopher Tauer, Margot Sonnleitner, Esther Egger, Reingard Grabherr and Stefan Heinl
    Citation: Microbial Cell Factories 2016 15:50
  36. Raspberry ketone is the primary aroma compound found in raspberries and naturally derived raspberry ketone is a valuable flavoring agent. The economic incentives for the production of raspberry ketone, combine...

    Authors: Danna Lee, Natoiya D. R. Lloyd, Isak S. Pretorius and Anthony R. Borneman
    Citation: Microbial Cell Factories 2016 15:49
  37. With increasing concern about the environmental impact of a petroleum based economy, focus has shifted towards greener production strategies including metabolic engineering of microbes for the conversion of pl...

    Authors: Sarah Rodriguez, Charles M. Denby, T. Van Vu, Edward E. K. Baidoo, George Wang and Jay D. Keasling
    Citation: Microbial Cell Factories 2016 15:48
  38. Protein secretion to the periplasm of Escherichia coli offers an attractive route for producing heterologous proteins including antibodies. In this approach, a signal peptide is fused to the N-terminus of the het...

    Authors: Yizhou Zhou, Peter Liu, Yutian Gan, Wendy Sandoval, Anand Kumar Katakam, Mike Reichelt, Linda Rangell and Dorothea Reilly
    Citation: Microbial Cell Factories 2016 15:47
  39. Several plant diterpenes have important biological properties. Among them, forskolin is a complex labdane-type diterpene whose biological activity stems from its ability to activate adenylyl cyclase and to ele...

    Authors: Codruta Ignea, Efstathia Ioannou, Panagiota Georgantea, Fotini A. Trikka, Anastasia Athanasakoglou, Sofia Loupassaki, Vassilios Roussis, Antonios M. Makris and Sotirios C. Kampranis
    Citation: Microbial Cell Factories 2016 15:46
  40. Despite the progressive miniaturization of bioreactors for screening purposes, shake flasks are still widespread in biotechnological laboratories and industry as cultivation vessels. Shake flasks are often app...

    Authors: David Flitsch, Tobias Ladner, Mihaly Lukacs and Jochen Büchs
    Citation: Microbial Cell Factories 2016 15:45
  41. PM100117 and PM100118 are glycosylated polyketides with remarkable antitumor activity, which derive from the marine symbiotic actinobacteria Streptomyces caniferus GUA-...

    Authors: Raúl García Salcedo, Carlos Olano, Cristina Gómez, Rogelio Fernández, Alfredo F. Braña, Carmen Méndez, Fernando de la Calle and José A. Salas
    Citation: Microbial Cell Factories 2016 15:44
  42. Nitrogen fixation has been established in protokaryotic model Escherichia coli by transferring a minimal nif gene cluster composed of 9 genes (nifB, nifH, nifD, nifK, nifE, nifN, nifX, hesA and nifV) from Paenib...

    Authors: Xin-Xin Li, Qi Liu, Xiao-Meng Liu, Hao-Wen Shi and San-Feng Chen
    Citation: Microbial Cell Factories 2016 15:43
  43. Marine mud is an abundant and largely unexplored source of enzymes with unique properties that may be useful for industrial and biotechnological purposes. However, since most microbes cannot be cultured in the...

    Authors: Wenyuan Gao, Kai Wu, Lifeng Chen, Haiyang Fan, Zhiqiang Zhao, Bei Gao, Hualei Wang and Dongzhi Wei
    Citation: Microbial Cell Factories 2016 15:41
  44. Lactic acid is a versatile chemical platform with many different industrial applications. Yeasts have been demonstrated as attractive alternative to natural lactic acid producers since they can grow at low pH,...

    Authors: Nadia Maria Berterame, Danilo Porro, Diletta Ami and Paola Branduardi
    Citation: Microbial Cell Factories 2016 15:39

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