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Table 2 Plasmid, strain or primer

From: Overexpression of membrane-bound gluconate-2-dehydrogenase to enhance the production of 2-keto-d-gluconic acid by Gluconobacter oxydans

plasmid, strain or primer

Description or primer sequence

Source or added sitea

Plasmid

 pRK2013

KmR, mob+, tra+, helper plasmid

Laboratory stored

 pBBR1MCS5

Broad-host-range cloning vector; mod, rep, Gm R , lacZ

[21]

 pBBR1MCS5-P tufB -ga2dh

pBBRMCS5 derivative expressing gox1230-gox1232 containing a tufB promoter, Gm R

This study

 pBBR1MCS5-P ga2dh -ga2dh

pBBRMCS5 derivative expressing gox1230-gox1232 containing a ga2dh promoter, Gm R

This study

 pBBR1MCS5-P gHp0169 -ga2dh

pBBRMCS5 derivative expressing gox1230-gox1232 containing a gHp0169 promoter, Gm R

This study

Strain

 E. coli DH5α

F-, ϕ80, lacZ∆M15, ∆(lacZYA-argF), U169, endA1, recA1, hsdR17(rk-mK+), supE44, λ, thi-1, gyrA96, relA1, phoA

Tiangen, Beijing, China

 G. oxydans

Wild type, cefR

DSM2003

 G. oxydans_pBBR1MCS5

G. oxydans contain plasmid pBBR1MCS5

This study

 G. oxydans_tufB_ga2dh

G. oxydans contain plasmid pBBR1MCS5-P tufB -ga2dh, CefR, GmR

This study

 G. oxydans_g2adh_ga2dh

G. oxydans contain plasmid pBBR1MCS5-P ga2dh -ga2dh, CefR, GmR

This study

 G. oxydans_gHp0169_ga2dh

G. oxydans contain plasmid pBBR1MCS5-P gHp0169 -ga2dh, CefR, GmR

This study

Primer

 ga2dhf

CTATCTAGAGGAGAAACCTGTGCCCCCCATG

XbaI

 ga2dhr

GAGGGATCCTTCAGTTCAGTGAGACCGCATCATC

BamHI

 P tufB _f

ACTGAGCTCCGATGGTAAGAAATCCACTGC

SacI

 P tufB _r

ATATCTAGACCAAAACCCCGCTCCACC

XbaI

 P-ga2dh_f

CACTCTAGACAGAACCAGTGGCCGCCCCGACAAC

XbaI

 P-ga2dh_r

GAGCTGCAGTTCAGTTCAGTGAGACCGCATCATC

PstI

 P-gHp0169_f

ATAGAGCTCTGAAAGCGGCTGGCGCGT

SacI

 P-gHp0169_r

GCATCTAGAGCGGAAGGCGTTATACCCTGA

XbaI

rtPCR primers

 16s-RNA_f

GCGGTTGTTACAGTCAGATG

 

 16s-RNA_r

GCCTCAGCGTCAGTATCG

 

 gox1230_f

GCTGGAGCGAGGAAGACATC

 

 gox1230_r

CGGGTGGCAGACTTTTGAG

 

 gox1231_f

CCAGAACCTGTCCCAGTCCAC

 

 gox1231_r

CGACAACATTACGGCAAAGG

 

 gox1232_f

CGACAACATTACGGCAAAGG

 

 gox1232_r

GCCAGGGAAACCCAGCAT

 

 gox0265_f

AATGTTCGAGTGGGGTGGTC

 

 gox0265_r

CCCTTGGCGTCCTTTTCAG

 
  1. aRestriction endonuclease sites underlined