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Table 2 Plasmids used

From: Steroid biotransformations in biphasic systems with Yarrowia lipolytica expressing human liver cytochrome P450 genes

Plasmid

Description

Marker gene (selection in yeast)

Reference

p64ICL1

Parental vector for multicopy integration in Y. lipolytica

ura3d4 (mc)a

[51]

p65ICL1

Parental vector for single copy integration in Y. lipolytica

ura3d1 (sc) a

[51]

p67RYL

Source for Y. lipolytica cytochrome P450 reductase (YlCPRwt)

ura3d4 (mc)a

[22, 49]

pNMTS-CYP-OR-spe

Source for codon optimized human cytochrome P450 3A4 (3A4syn)

 

Weis et al., unpublished (IMBT, TU Graz)

pBdpTrcRed-3A4(192v)wtA305S

Source for codon optimized human cytochrome P450 reductase (hCPRsyn)

 

Weis et al., unpublished (IMBT, TU Graz)

ID7262313

Source for cDNA wild-type human cytochrome P450 reductase (hCPRwt)

 

BioCat, Germany

Cloning vectors:

pJet1.2

E. coli cloning vector

 

Fermentas, Germany

p64D-linker

Cloning and basic integrative multicopy vector

ura3d4 (mc) a

This work

p65D-linker

Cloning and basic integrative single copy vector, negative control

ura3d1 (sc) a

This work

Integrative vectors for CPR and CYP expression in Y. lipolytica:

p64D-hCPRwt-2D6syn

Multicopy coexpression of human wild-type CPR (hCPRwt), codon optimized CPR (hCPRsyn) or Y.lipolytica-own CPR (YlCPR) in combination with codon optimized CYP2D6 or codon optimized CYP3A4, respectively.

ura3d4 (mc) a

This work

p64D-hCPRsyn-2D6syn

   

p64D-hCPRwt-3A4syn

   

p64D-YlCPR-2D6syn

   

p64D-YlCPR-3A4syn

   

p65D-hCPRwt-2D6syn

Single copy coexpression of human wild-type CPR (hCPRwt) or Y. lipolytica-own CPR (YlCPR) in combination with codon optimized CYP2D6 or codon optimized CYP3A4, respectively.

ura3d4 (mc) a

This work

p65D-hCPRwt-3A4syn

   

p65D-YlCPR-2D6syn

   

p65D-YlCPR-3A4syn

   
  1. aURA3 marker genes for single copy (sc, ura3d1) or multicopy (mc, ura3d4) selection with different promoter lengths.