Strain or plasmid | Characteristics | Source |
---|---|---|
C. glutamicum strains | ||
 DelAro4-4clPc C5 mufasOBCD1 PO6-iolT1 ∆pyc (M-CoA) | Prophage-free derivative of ATCC13032 with an in-frame deletion of cg0344-47, cg0503, cg2625-40, and cg1226. Chromosomal integration of the codon-optimized gene variant 4clPcCg encoding 4-coumarate: CoA ligase from parsley (Petroselinum crispum) (Δcg0344-47:PT7-4clPcCg) Exchange of the native promotor of the citrate synthase gene gltA by dapA promotor variant C5. Mutated fasO binding site upstream of accBC and accD1. Two point mutations in the promotor of the inositol transporter gene iolT1 abolish repression of iolT1 by IolR. In-frame deletion of pyc (cg0791) encoding pyruvate carboxylase | [50] |
 DelAro5 C7 PO6-iolT1 (p-CA1) | Prophage-free derivative of ATCC13032 with in-frame deletions of cg0344-cg0347, cg2625-cg2640, cg1226, cg502, and cg3349-cg3354 (DelAro5). Exchange of the native promotor of the citrate synthase gene gltA by dapA promotor variant C7. Two point mutations in the promotor of the inositol transporter gene iolT1 abolish repression of iolT1 by IolR | [35] |
 p-CA1 ∆phdA (p-CA2) | p-CA1 derivative with an in-frame deletion of phdA (cg0341) encoding an endogenous acyl:CoA ligase | This work |
 p-CA2 GTG-pheA | p-CA2 derivative with start codon replacement (ATG→GTG) of pheA (cg3207) encoding prephenate dehydratase | This work |
 p-CA2 AroF-S188C | p-CA2 derivative harboring the mutated DAHP synthase AroF carrying the amino acid substitution S188C | This work |
 p-CA2 GTG-pheA AroF-S188C (p-CA3) | p-CA2 derivative with start codon replacement (ATG→GTG) of pheA (cg3207) encoding prephenate dehydratase and harboring the mutated DAHP synthase AroF carrying the amino acid substitution S188C | This work |
 p-CA3 TrpE-P304S (p-CA4) | p-CA3 derivative harboring the mutated anthranilate synthase component I TrpE carrying the amino acid substitution P304S | This work |
 p-CA4 ∆phdT (p-CA5) | p-CA4 derivative with an in-frame deletion of phdT (cg0340) encoding the phenylpropanoid transporter PhdT | This work |
 p-CA5 ATG-aroK (p-CA6) | p-CA5 derivative with start codon replacement (GTG→ATG) of aroK (cg1828) encoding shikimate kinase | This work |
 p-CA6 IGR9::aroF*EcCg (p-CA7) | p-CA6 derivative with genomic integration of aroF*EcCg encoding AroF* from E. coli (codon-optimized gene) under control of the dapA promotor variant A16 | This work |
 p-CA7 ∆pyk (p-CA8) | p-CA7 derivative with an in-frame deletion of pyk (cg2291) encoding pyruvate kinase | This work |
E. coli strains | ||
 E. coli DH5α | F–Φ80lacZΔM15 Δ(lacZYA- argF)U169 recA1 endA1 hsdR17 (rK-, mK+) phoA supE44λ- thi-1 gyrA96 relA1 | Invitrogen (Karlsruhe, Germany) |
Plasmids | ||
 pMKEx2 | kanr; E. coli-C. glutamicum shuttle vector (lacI, PT7, lacO1, pHM1519 oriCg; pACYC177 oriEc) | [70] |
 pMKEx2-stsAhCg-4clPcCg | pMKEx2 derivative for expression of stsAhCg and 4clPcCg (codon-optimized genes) encoding stilbene synthase from Arachis hypogaea and 4-coumarate:CoA ligase from Petroselinum crispum | [31] |
 pEKEx3 | specr; E. coli-C. glutamicum shuttle vector (lacI, Ptac, lacO1, pBL1oriCg; pUCoriEc) | [72] |
 pEKEx3-aroHEc-talFjCg | pEKEx3 derivative for expression of aroHEc encoding DAHP synthase from E. coli and talFjCg (codon-optimized gene) encoding tyrosine ammonia-lyase from Flavobacterium johnsoniae | [31] |
 pK19mobsacB | kanr; vector for allelic exchange in C. glutamicum (pK18 oriVEc sacB lacZα) | [73] |
 pK19mobsacB-∆phdA | pK19mobsacB derivative for in-frame deletion of phdA | [37] |
 pK19mobsacB-GTG-pheA | pK19mobsacB derivative for the start-codon replacement of pheA (ATG→GTG) | This work |
 pK19mobsacB-AroF-S188C | pK19mobsacB derivative for site-directed mutagenesis of aroF encoding DAHP synthase from C. glutamicum resulting in the amino acid substitution S188C | This work |
 pK19mobsacB-TrpE-P304S | pK19mobsacB derivative for site-directed mutagenesis of trpE encoding anthranilate synthase component I from C. glutamicum resulting in the amino acid substitution P304S | This work |
 pK19mobsacB-∆phdT | pK19mobsacB derivative for in-frame deletion of phdT | [37] |
 pK19mobsacB-ATG-aroK | pK19mobsacB derivative for the start-codon replacement of aroK (GTG→ATG) | Mutz et al.(in preparation) |
 pK19mobsacB-IGR9::PdapA-A16-aroF*EcCg | pK19mobsacB-IGR9 derivative for genomic integration of aroF*EcCg, whose gene expression is under control of the dapA promotor variant A16 | Mutz et al.(in preparation) |
 pK19mobsacB-∆pyk | pK19mobsacB derivative for in-frame deletion of pyk | [74] |