Cost-effective production of alginate oligosaccharides from Laminaria japonica roots by Pseudoalteromonas agarivorans A3

Table 1 Secretome analysis of the extracellular carbohydrate-active enzymes of strain A3 cultured with L. japonica blade as the sole carbon source

Locus tag	Family	PSMs	Putative function^a	Abundance^b (%)
OIZ54_07305	PL18	89	Alginate lyase	48.90
OIZ54_07165	GH13	18	α-amylase	9.89
OIZ54_09065	PL6	16	Alginate lyase	8.79
OIZ54_09060	PL17	11	Alginate lyase	6.04
OIZ54_09025	PL6	8	Alginate lyase	4.40
OIZ54_00850	GH16	8	β-agarase	4.40
OIZ54_02445	GH16	7	Laminarinase	3.85
OIZ54_18130	GH13	6	Pullulanase	3.30
OIZ54_12210	PL7	5	Alginate lyase	2.75

^aPutative function was predicted by blasting the protein sequence against the NCBI database
^bAbundance was calculated based on the proportion of the PSMs of an enzyme in the sum of PSMs of all carbohydrate-active enzymes in the secretome. The enzymes with the abundance less than 2% in the secretome are not listed

ISSN: 1475-2859