Skip to main content

Table 1 The Pnt1 regulon

From: Engineering transcriptional regulation of pentose metabolism in Rhodosporidium toruloides for improved conversion of xylose to bioproducts

Protein

LFC

Description

12974

6.6

l-arabitol dehydrogenase

12977

6.3

l-arabitol dehydrogenase

16452

5.1

Predicted xylitol dehydrogenase

8504

4.9

Aldose 1-epimerase

8988

4.6

Predicted l-xylulose reductase

9990

4.4

Predicted d-arabitol dehydrogenase

14368

3.8

Ribulokinase

16635

3.5

p-Coumarate-CoA ligase

9798

3.2

RNA-binding polyadenylation factor

10421

2.2

Similar to 4-hydroxymuconic semialdehyde dehydrogenase

12248

2.1

NADP(+)-dependent glutamate dehydrogenase

9774

2.0

Xylose reductase

13328

1.3

d-lactate dehydrogenase

12976

(+)

Similar to xylose transporters

12917

(−)

Protein of unknown function

11642

− 1.9

Similar to lipid/aromatic oxidoreductases

13088

− 2.1

Metalloendoprotease

11085

− 2.2

Similar to nitronate monooxygenase

14597

− 2.2

Acetyl-CoA synthetase

9868

− 2.7

TPSO/MBR family protein

9856

− 3.0

NAD(+) specific glutamate dehydrogenase

15678

− 3.2

Protein of unknown function

  1. LFC: Log-Fold Change of OE-Pnt1 vs ∆Pnt1 on xylose. LFC could not be calculated for RTO4_12976 and RTO4_12917 as they were not detected in the ∆Pnt1 and OE-Pnt1 strain, respectively