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Table 2 List of plasmids used in this study

From: Mapping competitive pathways to terpenoid biosynthesis in Synechocystis sp. PCC 6803 using an antisense RNA synthetic tool

Plasmid

Relevant characteristics

Type of plasmid

References

pEEC

Self-replicating plasmid, derived from pPMQAK plasmid (RSF1010 based); Chloramphenicol resistance

Self-replicating

[18]

pEERM3

Integrative plasmid, targets slr0168 neutral site of Synechocystis genome; Kanamycin resistance

Integrative

[23]

p6EgIspS

Self-replicating plasmid, carrying the codon-optimized versions of dxs and idi genes from Coleus forskohlii and Synechocystis sp. PCC 6803, respectively, in an operon controlled by the constitutive Ptrc promoter and a bicistronic device; chloramphenicol resistance

Self-replicating, derived from pEEC

[18]

pAgBispA

plasmid carrying codon-optimized gene encoding Abies grandis bisabolene synthase, under control of the Ptrc promoter

Self-replicating, derived from pEEC

[2]

pEEC_PnrsB-hfq

plasmid carrying hfq gene from E. coli under control of the Nickel-inducible PnrsB promoter and RBS*

Self-replicating, derived from pEEC

This study

pEERM3_2MEP

Integrative plasmid (targets slr0168 neutral site of Synechocystis genome) carrying the codon-optimized versions of dxs and idi genes from Coleus forskohlii and Synechocystis sp. PCC 6803, respectively, in an operon controlled by the constitutive Ptrc promoter and a bicistronic device. Kanamycin resistance

Integrative, derived from pEERM3

This study

pEERM3_2MEP-AgB

Integrative plasmid (targets slr0168 neutral site of Synechocystis genome) the 2 MEP genes as an operon, as well as the bisabolene synthase gene under control of the constitutive Ptrc promoter and a bicistronic device. Kanamycin resistance

Integrative, derived from pEERM3_2MEP

This study

pEEC_Hfq_ X

plasmid carrying both the hfq cassette, controlled by PnrsB promoter, and the antisense-RNA cassette, controlled by the constitutive Ptrc1O promoter; X can be ccmA, crtB, chlP, citS, pdhB, pepC, ddH, gpi, sqs, thiG, ilvB, ilvG or atpB

Self-replicating, derived from pHfq

This study