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Table 4 Main strains and plasmids used in this study

From: Engineering of global transcription factor FruR to redirect the carbon flow in Escherichia coli for enhancing l-phenylalanine biosynthesis

Strains

Characteristics

Sources

E. coli W3110MT

W3110 derived mutant, l-tyrosine auxotrophic

Our lab

PHE01

W3110MT p15A::pL-aroF-tyrA1−121-pR-pheAT326P, kanamycin resistance

Our lab

PHE02

PHE01/pCas9, spectinomycin resistance

This work

PHE03

PHE01ΔfurR

This work

PHE04

PHE01ΔaroFMT:: aroFWT

This work

PHE05

PHE01ΔpheAMT:: pheAWT

This work

PHE06

PHE01ΔfruR::CmR/pmtr-RFP

This work

PHE07

PHE01ΔfurR::furRE173K

This work

PHE08

PHE01ΔfurR::furRA18P

This work

PHE09

PHE01ΔfurR::furRL3F−L170N

This work

PHE10

PHE01ΔfurR::furRS75I−V160E

This work

PHE11

PHE01ΔfurR::furRP219H

This work

PHE12

PHE01ΔfurR::furRI144T

This work

PHE13

PHE01ΔfurR::furRE72R−P128A

This work

PHE14

PHE01ΔfurR::furRR312G

This work

Plasmids

pCas

expressing Cas9 protein and offering sgRNA for removing donor plasmid, Spectinomycin resistance

[33]

pGRB

plasmid for expressing sgRNA or with offering donor DNA, Ampicillin resistance

[33]

pGRB-ΔfruR

pGRB fruR-sgRNAa

This work

pGRB-aroFWT

pGRB aroFMT-sgRNA ΔaroFMT::aroFWT

This work

pGRB-pheAWT

pGRB pheAMT-sgRNA ΔpheAMT::pheAWT

This work

pGRB-ΔfruR::CmR

pGRB fruR-sgRNA ΔfruR::CmR

This work

pGRB-fruRMT

pGRB CmR-sgRNA ΔCmR::fruRMT

This work

pmtr-RFP

pBR332 pmtr-RFP (L-PHE biosensor)

This work

  1. afruR-sgRNA, sgRNA with an N20 sequence for targeting the fruR gene locus