Table 2 Identification and expression (RPKM) of A. nidulans genes homologous to the LRA genes of S. stipitis

LRA1/RHA1 (jgi|Picst3|50944)

AN4186 (chr. II)

5.0E−86

Picst3|50944 (1.24E−90)

11

983

9

AN1886 (chr. VII)

5.0E−61

Picst3|50944 (1.06E−53)

0.31^a

0.49^a

0.45^a

LRA2 (jgi|Picst3|63908)

AN3740 (chr. II)

5.0E−56

Picst3|63908 (5.18E−42)

28

185

35

LRA3 (jgi|Picst3|50672)

AN5672 (chr. V)

5.0E−171

Picst3|50672 (0)

49

1785

116

LRA4 (jgi|Picst3|64442)

AN7929 (chr. II)

9.0E−40

Picst3:64442 (3.1E−35)

0^a

0.57^a

3

AN0617 (chr. VIII)

1.0E−38

Picst3:64442 (2.47E−30)

0.78^a

1.27^a

1.43^a

AN10990 (chr. IV)

1.0E−35

Picst3:64442

6

6

3

AN2859 (chr. VI)

1.0E−33

Picst3:64442

30

28

33

AN1503 (chr. VII)

2.0E−33

Picst3:64442

55

23

44

Rhamnosidases:

rhaA/AN10277

0.55^a

1244

3

rhaE/AN7151

0.19^a

542

0.4^a

Reference genes:

nkuA/AN7753

1.21^a

1.74^a

1.57^a

benA/AN1182

207

246

226

H2B/AN3469

2490

2888

2642