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Table 2 The plasmids used in this work

From: A modular pathway engineering strategy for the high-level production of β-ionone in Yarrowia lipolytica

Name

Relative characteristics

Source

pUC19

 

TaKaRa

pTAs-HUH

HisG-Ura3-HisG maker recycled cassette

[36]

pCAS1yl

TRP1 Guide RNA module and Cas9 expression cassette in pMCSCen1

[36]

pCAS1yl-ku70

Ku70 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-ku80

Ku80 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-rDNA

rDNA Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-D17

D17 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-lip1

Lip1 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-pox3

Pox3 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-pox4

Pox4 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-pox5

Pox5 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-LEU2

LEU2 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pCAS1yl-XPR2

XPR2 Guide RNA module and Cas9 expression cassette in pMCSCen1

This work

pUC19-TBX

PTEF1-CarB-xpr2t cassette in pUC19

This work

pUC19-ERPL

PEXP1-CarRP-lip2t cassette in pUC19

This work

pUC19-GCM

PGPD2-CCD1-mig1t cassette in pUC19

This work

pUC19-TGX

PTEF1-GGS1-xpr2t cassette in pUC19

This work

pUC19-GTM

PEXP1-tHMG1-lip2t cassette in pUC19

This work

pUC19-rDNA-BPC

PTEF1-CarB-xpr2t and PEXP1-CarRP-lip2t and PGPD2-CCD1-mig1t cassettes in pUC19-rDNA-HUH

This work

pUC19-ku70-BPC

PTEF1-CarB-xpr2t and PEXP1-CarRP-lip2t and PGPD2-CCD1-mig1t cassettes in pUC19-ku70-HUH

This work

pUC19-ku80-GGS1-HUH

PTEF1-GGS1-xpr2t cassette in pUC19-ku80-HUH

This work

pUC19-D17-tHMG1-HUH

PEXP1-tHMG1-lip2t cassette in pUC19-D17-HUH

This work

pUC19-lip1-ERG10ERG13-HUH

PTEF1-ERG10-erg10t and PGPD2-ERG13-erg13t cassettes in pUC19-lip1-HUH

This work

pUC19-POX3-IDIERG20-HUH

PEXP1-IDI-idit and PTEF1-ERG20-erg20t cassettes in pUC19-pox3-HUH

This work

pUC19-POX5-ERG8ERG12ERG19-HUH

PEXP1-ERG8-erg8t, PTEF1-ERG12-erg12t and PGPD2-ERG19-erg19t cassettes in pUC19-pox5-HUH

This work

pUC19-rDNA-BB-PK–PTA-HUH

PGPD2-B. b pk-mig1t-PTEF1-B. s pta-xpr2t cassettes in pUC19-rDNA-HUH

This work

pUC19-rDNA-BC-PK–PTA-HUH

PGPD2-B. b pk-mig1t-PTEF1-C. k pta-xpr2t cassettes in pUC19-rDNA-HUH

This work

pUC19-rDNA-LB-PK–PTA-HUH

PGPD2-L. m pk-mig1t-PTEF1-B. s pta-xpr2t cassettes in pUC19-rDNA-HUH

This work

pUC19-rDNA-LC-PK–PTA-HUH

PGPD2-L. m pk-mig1t-PTEF1-C. k pta-xpr2t cassettes in pUC19-rDNA-HUH

This work

pUC19-POX4-BB-PK–PTA-HUH

PGPD2-B. b pk-mig1t-PTEF1-B. s pta-xpr2t cassettes in pUC19-POX4-HUH

This work

pUC19-XPR2-BB-PK–PTA-HUH

PGPD2-B. b pk-mig1t-PTEF1-B. s pta-xpr2t cassettes in pUC19-XPR2-HUH

This work

  1. Other plasmids can be found in Additional file 3