Table 3 Experimental datasets used for the model reconstruction
Strain | Substrate | Growth mode | Dataset name (Figures 4 + 5) | Used for: |
|---|---|---|---|---|
WT | Glucose | Flask | – | Determining biomass composition and energy requirements (“Metabolic reconstruction” and “Resequencing reveals inconsistencies between the “same” strains L. reuteri DSM 20016 and JCM 1112—implications for glycolytic genes” sections) |
WT | Glucose | Reactor | A | Model validation |
WT | Glucose + glycerol | Reactor | B | Model validation |
SJ (WT*) | Glucose | Flask | C | Model validation and model predictions |
SJ (WT*) | Glucose + glycerol | Flask | D | Model validation and model predictions |
SJΔadhE | Glucose | Flask | E | Model validation and model predictions |
SJΔadhE | Glucose + glycerol | Flask | F | Model validation and model predictions |