From: Engineering the oleaginous yeast Yarrowia lipolytica to produce the aroma compound β-ionone
Primer | Gene/fragment information | Sequence in 5′ to 3′ orientation |
---|---|---|
URA3_1 | Selection marker | TCC ATA TGA ATT ATG CAT GCA TAA CTT CGT ATA ATG TAT GCT ATA CGA AGT TAT ACC AAA ATG CCC TCC TAC GAA GCT CGA GC |
URA3_2 | Selection marker | CCA CAT GTG GGA ATT CAT AAC TTC GTA TAG CAT ACA TTA TAC GAA GTT ATC GAG AAA CAC AAC AAC ATG CCC CAT TGG AC |
TEF_1 | TEF promoter-XPR2 terminator cassette | GGA ATT CCG GGT TTA AAC AGA GAC CGG GTT GGC GGC GTA TTT G |
TEF_XPR2_1 | TEF promoter-XPR2 terminator cassette | TAG GGT ACC TCT AGA CGT CCA CCC GGG AAG GAT CCT TTG AAT GAT TCT TAT ACT CAG AAG |
TEF_XPR2_2 | TEF promoter-XPR2 terminator cassette | CTT CTG AGT ATA AGA ATC ATT CAA AGG ATC CTT CCC GGG TGG ACG TCT AGA GGT ACC CTA |
XPR2_1 | TEF promoter-XPR2 terminator cassette | CCA CAT GTG GAC GTC GAC GCC ACC TAC AAG CCA GAT TTT CTA TTT AC |
ARS_1 | Yarrowia automatously replicating sequence | TCC ATA TGC CAG TCT ACA CTG ATT AAT TTT CGG G |
ARS_2 | Yarrowia automatously replicating sequence | TTG CAT GCA TAA GCT AAA AGT AAC TCG CAG CGC A |
rDNA_1 | Ribosomal DNA integration site | TCC ATA TGG CGG CCG CGG GTC CGG CTG CCA GTT GCC CAG CCG CCA G |
rDNA_2 | Ribosomal DNA integration site | ATG CAT GCT GGT GGT AGT AGC AAA TAT TCA AAT G |
rDNA_3 | Ribosomal DNA integration site | GCG TCG ACG TTG GCG CGC CTG CTT CGG TAT GAT AGG AAG AGC CG |
rDNA_4 | Ribosomal DNA integration site | CCA CAT GTG CGG CCG CGG CAG ACA CTG CGT CGC TCC GTC CAC |
TEF_Casset_1 | TEF promoter | GCG TCG ACA GAG ACC GGG TTG GCG GCG TAT TTG |
TEF_Casset_2 | TEF promoter | TTG GCG CGC CAG AGA CCG GGT TGG CGG CGT ATT TG |
XPR2-Casset_1 | XPR2 terminator | TTG GCG CGC CGC CAC CTA CAA GCC AGA TTT TCT ATT TAC |
ACAT_F: | Acetyl-CoA thiolase | GGA TCC ATG CGA CTC ACT CTG CCC CGA CTT |
ACAT_R | Acetyl-CoA thiolase | CCT AGG CTA CTC GAC AGA AGA GAC CTT CTT G |
NphT7_F | Acetoacetyl CoA synthase | GGA TCC ATG ACT GAT GTC CGA TTC CGC ATT ATC |
NphT7_R | Acetoacetyl CoA synthase | CCT AGG TTA CCA CTC AAT CAG AGC GAA GCT |
HMGS_F | HMG-CoA synthase | GGA TCC ATG TCG CAA CCC CAG AAC GTT GG |
HMGS_R | HMG-CoA synthase | CCT AGG CTA CTG CTT GAT CTC GTA CTT TCG |
IPI_F | IPP isomerase | TGA TCA ATG CTT CGT TCG TTG CTC AGA GGC |
IPI_R | IPP isomerase | CCT AGG TCA CGC TTC GTT GAT GTG ATG CAC |
tHMGR_F | Truncated HMG-CoA reductase | TGA TCA ATG CGA GAA GTT GTG CGA ACC CAG |
tHMGR-R | Truncated HMG-CoA reductase | CCT AGG CTA TGA CCG TAT GCA AAT ATT CGA AC |
MK_F | Mevalonate kinase | TGA TCA ATG GAC TAC ATC ATT TCG GCG C |
MK_R | Mevalonate kinase | CCT AGG CTA ATG GGT CCA GGG ACC GAT |
PMK_F | Phosphomevalonate kinase | GGA TCC ATG ACC ACC TAT TCG GCT CCG GG |
PMK_R | Phosphomevalonate kinase | CCT AGG CTA CTT GAA CCC CTT CTC GAG CC |
MPD_F | Mevalonate pyrophosphate decarboxylase | TGA TCA ATG ATC CAC CAG GCC TCC ACC ACC |
MPD_R | Mevalonate pyrophosphate decarboxylase | CCT AGG CTA CTT GCT GTT CTT CAG AGA ACC |
FPPS_F | Fusion gene of farnesyl pyrophosphate synthase and geranyl pyrophosphate synthase | GGA TCC ATG CGG GAT CCA TGT CCA AGG CGA |
FPPS::GGPPS_R | Fusion gene of farnesyl pyrophosphate synthase and geranyl pyrophosphate synthase | AAA TCC GCG CTG TTA TAA TCC ATA GAA CCA CCA CCC TTC TGT CGC TTG TAA ATC TTG G |
FPPS::GGPPS_F | Fusion gene of farnesyl pyrophosphate synthase and geranyl pyrophosphate synthase | CCA AGA TTT ACA AGC GAC AGA AGG GTG GTG GTT CTA TGG ATT ATA ACA GCG CGG ATT T |
GGPPS_R | Fusion gene of farnesyl pyrophosphate synthase and geranyl pyrophosphate synthase | C CTA GGT CAC TGC GCA TCC TCA AAG TAC TTT C |
OfCCD1_F | Carotenoid cleavage dioxygenase 1 | GGA TCC ATG GGT ATG CAG GGC GAG GAT GCT |
OfCCD1_R | Carotenoid cleavage dioxygenase 1 | CCT AGG TTA CAC CTT AGC CTG CTC CTG GAG C |