RNA-Seq analysis uncovers non-coding small RNA system of Mycobacterium neoaurum in the metabolism of sterols to accumulate steroid intermediates

Table 4 Representation of the most abundant upregulated sRNAs in regulatory networks of Mn-9OHAD/CC, Mn-ADD/CC, and Mn-BNA/CC

SRNA ID	Mn-9OHAD/CC		Mn-ADD/CC		Mn-BNA/CC
SRNA ID	Fold change^a	Num^b	Fold change	Num	Fold change	Num
131	Infinity	14	Infinity	18	Infinity	15
138	4.6	13	14.3	21	10.4	18
222	2.3	27	8.7	40	12.9	32
79	5.8	17	7.5	27	3.7	22
112	Infinity^c	18	Infinity	15	Infinity	19
255	Infinity	6	Infinity	13	Infinity	10
125	Infinity	4	Infinity	5	Infinity	5
188	Infinity	4	Infinity	9	Infinity	6
105	Infinity	5	Infinity	13	Infinity	10
107	Infinity	3	Infinity	9	Infinity	4
248	Infinity	1	Infinity	2	Infinity	2
146	4.0	33	3.8	52	NF	NF
66	2.3	11	2.4	18	NF	NF
20	NF^d	NF	3.0	36	3.7	27
38	NF	NF	4.9	24	4.3	34

^a The RPKM ratio of sRNA candidate expressed in the form of Mn-9OHAD/CC, Mn-ADD/CC, and Mn-BNA/CC
^b Number of genes regulated by sRNA candidates
^c The RPKM of sRNA candidate in Mn-CC is zero
^d Not found

ISSN: 1475-2859