From: Deregulation of purine pathway in Bacillus subtilis and its use in riboflavin biosynthesis
Name | Relevant genotype a | Source/reference |
---|---|---|
Strains | Â | Â |
B. subtilis 168 | Wide-type strain, trpC2 | Lab Stock |
E. coli DH5α | Standard cloning strain | Invitrogen |
BS77 | B. subtilis 168Δupp ribC* ribO* yhcF* yvrH* ywaA* | This study |
BS89 | BS77, P 43 ::ribA | This study |
BS93 | BS77, P 43 ::ribA P 43 ::ribG ΔribP1 ΔribO | This study |
BS96 | BS77, P 43 ::ribA ΔribO | This study |
BS102 | BS77, P 43 ::ribA ΔpurR | This study |
BS103 | BS77, P 43 ::ribA ΔpurR P pur (-10*) | This study |
BS104 | BS77, P 43 ::ribA ΔpurR Δatt | This study |
BS106 | BS77, P 43 ::ribA ΔpurR Δatt P 43 ::purF | This study |
BS107 | BS77, P 43 ::ribA ΔpurR Δatt P pur (-10*) | This study |
BS110 | BS77, P 43 ::ribA ΔpurR Δatt P 43 ::purF D293V K316Q S400W | This study |
BS111 | BS77, P 43 ::ribA ΔpurR Δatt P 43 ::purF K326Q P410W(E. coli) | This study |
Plasmids | Â | Â |
pUC18 | Ampr | Lab Stock |
pC194 | Cmr, Bacillus cloning vector | Lab Stock |
pSS | Ampr, Cmr, pUC18 containing cat-upp cassette | [36] |
pSS-P43-ribA-FB | Ampr, Cmr, containing ribA upstream and downstream flanks under P 43 promoter | This study |
pSS-P43-ribG-FB | Ampr, Cmr, containing ribG upstream and downstream flanks under P 43 promoter | This study |
pSS-ribO-FB | Ampr, Cmr, containing ribO flanks | This study |
pSS-purR-FB | Ampr, Cmr, containing purR flanks | This study |
pSS-(-10*)-FB | Ampr, Cmr, containing Ppur(-10*) mutant flanks | This study |
pSS-att-FB | Ampr, Cmr, containing att flanks | This study |
pSS-P43-purF-FB | Ampr, Cmr, containing purF (from B. subtilis) upstream and downstream flanks under P 43 promoter | This study |
pSS-purF*(bsu)-FB | Ampr, Cmr, containing purF mutant (from B. subtilis) flanks | This study |
pSS-purF*(eco)-FB | Ampr, Cmr, containing purF mutant (from E.coli) upstream and downstream flanks under P 43 promoter | This study |