Characterisation of recombinant pyranose oxidase from the cultivated mycorrhizal basidiomycete Lyophyllum shimeji (hon-shimeji)

Table 1 Comparison of codon usage frequency for selected codons that are specifically supported by E. coli Rosetta 2 in the genes encoding pyranose oxidase from L. shimeji, T. multicolor and P. chrysosporium.

Codon	Amino acid	Frequency of codon used (per 1000 codons)
		Ls P2Ox	Tm P2Ox	Pc P2Ox
AGG	Arg	11.31	4.81	4.82
AGA	Arg	4.85	0.00	1.61
CGG	Arg	8.08	4.81	1.61
GGA	Gly	25.85	14.42	8.04
AUA	Ile	3.23	1.60	1.61
CUA	Leu	6.46	1.60	0.00
CCC	Pro	19.39	16.03	32.15

The number of occurrence of the selected codons per 1000 codons is given http://www.ebioinfogen.com/biotools/codon-usage.htm.

ISSN: 1475-2859