Table 1 Best hits of BLAST analysis of the E. coli K-12 atoC gene against the genomes of all microorganisms
From: The role of bacterial antizyme: From an inhibitory protein to AtoC transcriptional regulator
Locus or Accession No | Genome annotation | Microorganism [Taxa] | Hitsa | Id./Sim.b(%/%) | Ref. |
|---|---|---|---|---|---|
Q06065 ATOC ECOLI | Acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) | Escherichia coli K12 [enterobacteria] | 2 | 95/95 | 16, 47, 48, 70 |
NP 754649.1 | Acetoacetate metabolism Regulatory protein atoC | Escherichia coli CFT073 [enterobacteria] | 3 | 95/95 | 71 |
ZP 00015409.1 | COG2204: Response regulator containing CheY-like receiver, AAA-type ATPase and DNA-binding domains | Rhodospirillum rubrum [a-proteobacteria] | 1 | 52/69 | 72 |
NP 953090.1 | Sigma-54 dependent DNA binding response regulator | Geobacter sulfurreducens PCA [d-proteobacteria] | 14 | 45/61 | 73 |
NP 972572.1 | sigma-54 dependent transcriptional regulator/response regulator | Treponema denticola ATCC 35405 [spirochetes] | 1 | 44/64 | 74 |
ZP 00079669.1 | COG2204: Response regulator containing CheY-like receiver, AAA-type ATPase and DNA-binding domains | Geobacter metallireducens [d-proteobacteria] | 13 | 42/63 | 72 |
YP 012430.1 | sigma-54 dependent transcriptional regulator/response regulator | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough [d-proteobacteria] | 5 | 43/61 | 75 |
NP 218960.1 | response regulatory protein (atoC) | Treponema pallidum subsp. pallidum str. Nichols [spirochetes] | 1 | 43/63 | 76 |
AAQ63912.1 | mutant NtrC-like activator | Myxococcus xanthus [d-proteobacteria] | 8 | 44/62 | 77 |
YP 008363.1 | probable two-component response regulator | Parachlamydia sp. UWE25 [chlamydias] | 1 | 44/62 | 78 |
ZP 00128642.1 | COG2204: Response regulator containing CheY-like receiver, AAA-type ATPase and DNA-binding domains | Desulfovibrio desulfuricans G20 [d-proteobacteria] | 4 | 42/61 | 72 |
NP 968400.1 | regulator protein pilR | Bdellovibrio bacteriovorus HD100 [d-proteobacteria] | 3 | 40/63 | 79 |
AAL27375.1 | HydG | Yersinia pestis [enterobacteria] | 1 | 43/62 | 80 |
NP 709798.1 | response regulator of hydrogenase 3 activity (sensor HydH) | Shigella flexneri 2a str. 301 [enterobacteria] | 2 | 44/61 | 81 |
NP 992358.1 | Response regulator containing CheY-like receiver, AAA-type ATPase and DNA-binding domains | Yersinia pestis biovar Medievalis str. 91001 [enterobacteria] | 1 | 43/63 | 82 |
NP 290636.1 | response regulator of hydrogenase 3 activity (sensor HydH) | Escherichia coli O157:H7 EDL933 [enterobacteria] | 2 | 44/60 | 83 |
NP 243814.1 | two-component response regulator in acetoacetate metabolism | Bacillus halodurans C-125 [eubacteria] | 1 | 41/62 | 84 |
Q9APD9 ZRAR KLEOX | Transcriptional regulatory protein zraR | Klebsiella oxytoca [enterobacteria] | 1 | 43/61 | 85 |
NP 312817.1 | GlnG; response regulator for gln | Escherichia coli O157:H7 [enterobacteria] | 1 | 40/58 | 86 |
P25852 ZRAR SALTY | Transcriptional regulatory protein zraR | Salmonella typhimurium LT2 [enterobacteria] | 2 | 43/60 | 87 |
NP 458044.1 | Two-component system, response regulator | Salmonella enterica subsp. enterica serovar Typhi str. CT18 [enterobacteria] | 2 | 40/58 | 88 |
YP 005107.1* | two-component response regulator | Thermus thermophilus HB27 [eubacteria] | 22 | 33/58 | 69 |