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Table 3 Bacterial strains and plasmids used in this study

From: A single vector-based strategy for marker-less gene replacement in Synechocystis sp. PCC 6803

Strain/plasmid

Characteristics

Selection markers

Source

E. coli

   

DH5α

Competent cells

  

Synechocystis

  

WT

WT Synechocystis sp PCC 6803, glucose tolerant

kanS, sucR

H. Pakrasi (Washington University, St. Louis)

lux prim

luxAB operon, interrupted by nptI-sacB cassette, replacing slr0168 ORF

kanR, sucS

This study

lux sec

Intact luxAB operon replacing slr0168 ORF

kanS, sucR

This study

psaA prim

At psaA gene, interrupted by nptI-sacB cassette, replacing endogenous psaA

kanR, sucS, heterotroph

This study

psaA sec

Intact At psaA gene replacing endogenous psaA

kanS, sucR, photoautotroph

This study

Plasmids

   

pGEM-T Easy

Backbone for pDSpsaA

ampR

Promega, Madison, WI

pRL250

nptI-sacB double selection cassette, sacB gene from Bacillus subtilis

kanR, sucS

P. Wolk (Michigan State University)

pICH69822

Destination vector for Golden Gate cloning

kanR

E. Weber (Icon Genetics GmbH, Halle)

pRL1063a

luxAB operon from Vibrio fischeri

SmR

P. Wolk (Michigan State University)

pDSlux

pICH69822 with nptI-sacB cassette from pRL250, luxAB operon from pRL1063a, Syn psbA2 promoter and slr0168 flanking regions

kanR, sucS

This study

pDSpsaA

pICH69822 with nptI-sacB cassette from pRL250, At psaA gene and Syn psbA2 promoter and slr0168 flanking regions

kanR, sucS

This study

  1. Abbreviations: Syn Synechocystis, At Arabidopsis, R resistant, S sensitive.