Table 4 Comparison between the differential expressions measured using DNA microarrays and qRT-PCR
| Â | Â | Â | Pressure | Pressure oxygen | ||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | DNA microarrays | qRT-PCR | DNA microarrays | qRT-PCR | ||
ID | Name | Gene | FC | Adj. P-val | FC | FC | Adj. P-val | FC |
PP_4265 | transcriptional regulator Anr | anr | + 1.6 | 1.2 E-02 | + 1.3 | - 2.0 | 2.9 E-02 | - 2.6 |
PP_2257 | aerotaxis receptor Aer-1 | aer-1 | + 2.8 | 4.8 E-05 | - 3.5 | + 2.6 | 1.1 E-05 | - 1.7 |
PP_2258 | sensory box protein | Â | - 1.5 | 1.6 E-02 | - 1.6 | - 1.6 | 3.2 E-02 | - 2.2 |
PP_0504 | outer membrane OprG | oprG | + 2.5 | 5.8 E-04 | + 3.9 | - 3.4 | 3.1 E-04 | - 9.4 |
PP_3087 | excinuclease ABC A subunit putative (type VI) | Â | + 1.6 | 3.1 E-03 | + 1.4 | + 2.3 | 1.7 E-03 | + 1.9 |
PP_0104 | cytochrome c oxidase subunit I | Â | n. s. | Â | - 2.3 | - 1.7 | 5.6 E-03 | - 4.8 |
PP_4255 | cytochrome c oxidase cbb3-type, subunit I | ccoN-2 | - 1.4 | 3.0 E-02 | - 1.7 | - 1.5 | 7.4 E-04 | - 1.9 |
PP_4870 | azurin | azu | + 2.2 | 1.9 E-03 | + 2.0 | - 1.2 | 2.0 E-01 | - 1.9 |
PP_2439 | alkyl hydroxide reductase C subunit | ahpC | + 1.9 | 3.8 E-03 | + 2.1 | + 3.9 | 2.5 E-05 | + 3.7 |