Skip to main content

Table 2 Transmembrane domains (TMD) of the predicted carbohydrate transport proteins in Lactobacillus ruminis

From: Carbohydrate catabolic flexibility in the mammalian intestinal commensal Lactobacillus ruminis revealed by fermentation studies aligned to genome annotations

Family Gene Locus numbera Predicted substrate TMDb
   ATCC 25644 ATCC 27782   ATCC 25644 ATCC 27782
OHS lacY ANHS_218 - FOS 12 -
GPH lacY ANHS_744c
ANHS_924
- Lactose, galactose, galactan 12 -
  lacS ANHS_783 LRC_18250 Raffinose, stachyose, melibiose 12 12
  ugpE ANHS_648 LRC_16940 Glycerol 6 6
ABC ugpA ANHS_649c LRC_16950 Glycerol 6 6
  malG ANHS_839c LRC_18720 Maltose 6 6
  malF ANHS_840c LRC_18730 Maltose 8 8
  manY ANHS_242 LRC_18860 Mannose 7 7
  manZ ANHS_243 LRC_18850 Mannose 5 4
PTS scrA ANHS_846c LRC_18780 Sucrose, FOS 8 8
  fruA ANHS_1075 LRC_00800 Fructose 9 9
  celB ANHS_1218 LRC_02240 Cellobiose 10 10
  gluA ANHS_851c LRC_18820 Glucose 9 9
  1. a. Locus number in draft genome sequences
  2. b. TMD: predicted trans-membrane domains, as described in Materials & Methods