Skip to main content

Table 2 Transmembrane domains (TMD) of the predicted carbohydrate transport proteins in Lactobacillus ruminis

From: Carbohydrate catabolic flexibility in the mammalian intestinal commensal Lactobacillus ruminis revealed by fermentation studies aligned to genome annotations

Family

Gene

Locus numbera

Predicted substrate

TMDb

  

ATCC 25644

ATCC 27782

 

ATCC 25644

ATCC 27782

OHS

lacY

ANHS_218

-

FOS

12

-

GPH

lacY

ANHS_744c

ANHS_924

-

Lactose, galactose, galactan

12

-

 

lacS

ANHS_783

LRC_18250

Raffinose, stachyose, melibiose

12

12

 

ugpE

ANHS_648

LRC_16940

Glycerol

6

6

ABC

ugpA

ANHS_649c

LRC_16950

Glycerol

6

6

 

malG

ANHS_839c

LRC_18720

Maltose

6

6

 

malF

ANHS_840c

LRC_18730

Maltose

8

8

 

manY

ANHS_242

LRC_18860

Mannose

7

7

 

manZ

ANHS_243

LRC_18850

Mannose

5

4

PTS

scrA

ANHS_846c

LRC_18780

Sucrose, FOS

8

8

 

fruA

ANHS_1075

LRC_00800

Fructose

9

9

 

celB

ANHS_1218

LRC_02240

Cellobiose

10

10

 

gluA

ANHS_851c

LRC_18820

Glucose

9

9

  1. a. Locus number in draft genome sequences
  2. b. TMD: predicted trans-membrane domains, as described in Materials & Methods