From: Complete microbial synthesis of crocetin and crocins from glycerol in Escherichia coli
Strain/plasmid | Relevant property | Source | |
---|---|---|---|
strain | Â | Â | |
MG1655 | F−, λ−, rph-1 | KCTC | |
MGI | MG1655 ilvGΔ::PLac-dxs, glvCΔ::PLac-idi, yjbIΔ::PLac-ispA, agaAVΔ::PLac-dxr | [39] | |
MGI2E | MGI (pfkAΔ::PLac-CrtE, ushAΔ::PLac-CrtE) | This study | |
ZEA-1 | MGI2E (atpIΔ::Ptrc-CrtYIB, ldhAΔ::Ptrc-YZ) | This study | |
Z1pC | ZEA-1 harboring pSTVM_CsCCD2 | This study | |
Z1pCpA6803 | ZEA-1 harboring pSTVM_CsCCD2 and pBBR-A6803 | This study | |
Z1pCpA7942 | ZEA-1 harboring pSTVM_CsCCD2 and pBBR-A7942 | This study | |
Z1pCA7942(M) | ZEA-1 harboring pSTVM_CsCCD2_Syn-aldH7942(M) | This study | |
Z1pCA7942(P) | ZEA-1 harboring pSTVM_CsCCD2_Syn-aldH7942(P) | This study | |
Z1pCA7942(P)pN | ZEA-1 harboring pSTVM_CsCCD2_Syn-aldH7942(P) and pUCrop_NtUGT | This study | |
Z1pCA7942(P)pNC | ZEA-1 harboring pSTVM_CsCCD2_Syn-aldH7942(P) and pUCrop_NtUGT_CaUGT3 | This study | |
TOP10 | F-mcrAΔ(mrr-hsdRMS-mcrBC) φ80lacZΔM15 ΔlacX74 nupG recA1 araD139 Δ(ara-leu)7697 galE15 galK16 rpsL(StrR) endA1 | Invitrogen | |
BL21 (DE3) | F–ompT gal dcm lon hsdSB(rB–mB–) λ(DE3 [lacI lacUV5-T7p07 ind1 sam7 nin5]) [malB+]K−12(λS) | NEB | |
Synechocystis sp. PCC 6803 | wild type strain of Synechocystis sp.PCC6803 | Â | |
Synechocystis elongatus PCC 7942 | wild type strain of S. elongatus PCC7942 | Â | |
Plasmid | Â | Â | |
pKK223-3 | Ampr, tac promoter, pBR322 ori, rop | Pharmacia | |
pTrc99A | Ampr, trc promoter, pBR322 ori | [32] | |
pUCM | Ampr, constitutively expressed lac promoter, pUC ori | [29] | |
pUCrop | Ampr, constitutively expressed lac promoter, pUC ori, rop | [39] | |
pET21a(+) | Ampr, T7 promoter, C-terminal His-tag sequence, f1 ori, rop, | Novagen | |
pSTVM | Cmr, Cloning/expression vector removing lac promoter from pSTV29 | [33] | |
pBBR1MCS-2 | Kmr, Cloning vector | [40] | |
pUCM_CrtE | Ampr, pUCM derivative, expression vector for crtE from P. ananatis | [26] | |
pTrc99A_YIB | Ampr, pTrc99A derivative, expression vector for crtYIB from P. ananatis crtYIB operon at EcoRI/HindIII site | This study | |
pKK_CsCCD2 | Ampr, pKK-223-3 derivative, expression vector for CsCCD2 from C.sativus at EcoRI/HindIII site | This study | |
pSTVM_CsCCD2 | Cmr, pSTVM derivative, expression vector for CsCCD2 from C.sativus under tac promoter at BglII/NotI site | This study | |
pUCM_Syn-aldH6803 | Ampr, pUCM derivative, expression vector for aldH from Synechocystis sp. PCC6803 (Syn_aldH6803) at XbaI/EcoRI site | This study | |
pUCM_Syn-aldH7942 | Ampr, pUCM derivative, expression vector for aldH from Synechocystis sp. PCC7942 (Syn_aldH7942) at XbaI/EcoRI site | This study | |
pBBR-A6803 | Kmr, pBBR1MCS-2 derivative, expression vector for aldH from Synechocystis sp. PCC6803 (Syn_aldH6803) under lac promoter | This study | |
pBBR-A7942 | Kmr, pBBR1MCS-2 derivative, expression vector for aldH from S. elongatus PCC7942 (Syn_aldH7942) under lac promoter | This study | |
pSTVM_CsCCD2_Syn-aldH6803(M) | Cmr, pSTVM derivative, individual modular expression vector for CsCCD2 and Syn_aldH6803 | This study | |
pSTVM_CsCCD2_Syn-aldH7942(M) | Cmr, pSTVM derivative, individual modular expression vector for CsCCD2 and Syn_aldH7942 | This study | |
pSTVM_CsCCD2_Syn-aldH6803(P) | Cmr, pSTVM derivative, polycistronic expression vector for CsCCD2 and Syn_aldH6803 | This study | |
pSTVM_CsCCD2_Syn-aldH7942(P) | Cmr, pSTVM derivative, polycistronic expression vector for CsCCD2 and Syn_aldH7942 | This study | |
pUCrop_NtUGT | Ampr, pUCrop derivative, expression vector for NtUGT at XbaI/XmaI site | This study | |
pUCrop_NtUGT_CaUGT3 | Ampr, pUCrop derivative, expression vector for NtUGT and CaUGT3 at XbaI/NotI site | This study | |
pET21a(+)_GjUGT1 | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged GjUGT gene at EcoRI/XhoI site | This study | |
pET21a(+)_GT1-316 | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged GT1-316 gene at BamHI/SalI site | This study | |
pET21a(+)_NtUGT | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged NtUGT gene at BamHI/HindIII site | This study | |
pET21a(+)_FaGT2 | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged FaGT2 gene at BamHI/HindIII site | This study | |
pET21a(+)_StUGT | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged StUGT gene at EcoRI/XhoI site | This study | |
pET21a(+)_CaUGT3 | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged CaUGT3 gene at BamHI/SalI site | This study | |
pET21a(+)_NsUGT | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged NsUGT gene at BamHI/SalI site | This study | |
pET21a(+)_SpUGT | Ampr, pET21a(+) derivative, inducible expression of 6xHis-tagged SpUGT gene at BamHI/SalI site | This study | |
pMP11 | Ampr, pKD46 with constitutively expressed Cas9, aTc gRNA targeting ColE1 ori | [41] | |
pgRNA | Cmr, constitutively expressed sgRNA targeting | [41] | |
pgRNA_pfkA | Cmr, constitutively expressed sgRNA targeting pfkA, ColE1 ori | This study | |
pgRNA_ushA | Cmr, constitutively expressed sgRNA targeting ushA, ColE1 ori | This study | |
pgRNA_atpI | Cmr, constitutively expressed sgRNA targeting atpI, ColE1 ori | This study | |
pgRNA_ldhA | Cmr, constitutively expressed sgRNA targeting ldhA, ColE1 ori | This study |