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Table 5 The maximum rates of succinate growth-coupled production in iJR904 in rich medium (Strain0 in LB cultivation medium)

From: FastKnock: an efficient next-generation approach to identify all knockout strategies for strain optimization

Number of knocked out reactions

Deleted reactions

Biomass formation rate (h−1)

Succinate production rate (mmol.gDW−1 h−1)

Deleted genes

Co-Knockout reactions

Single

ADHEr

1.35

20.10

b1241

LCADi_copy2

Double

F6PA, PFK

1.28

33.69

b0825, b3946, b3916, b1723

−

Triple

ACKr, GLCpts, PYK

0.56

54.88

b2296, b3115, b1849, b1819, b2415, b2416, b1621, b1101, b2417, b1817, b1818, b1854, b1676

DHAPT, GART, PPAKr

Quadruple

ACKr, ARGDC, GLCpts, PYK

0.56

64.72

b2296, b3115, b1849, b2938, b4117, b1819, b2415, b2416, b1621, b1101, b2417, b1817, b1818, b1854, b1676

GART, PPAKr, DHAPTs