Skip to main content

Table 4 The maximum rates of succinate growth-coupled production in iML1515 (Strain0 in CM2 cultivation medium)

From: FastKnock: an efficient next-generation approach to identify all knockout strategies for strain optimization

Number of knocked out reactions

Deleted reactions

Biomass formation rate (h−1)

Succinate production rate (mmol.gDW−1 h−1)

Deleted genes

Co-Knockout reactions

Single

ATPS4rpp

0.25

12.73

b3735, b3737, b3738, b3732, b3733, b3736, b3734, b3731, b3739

–

Double

ATPS4rpp, PGL

0.24

16.54

b3735, b3737, b3738, b3732, b3733, b3736, b3734, b3731, b3739, b0767

–

Triple

PGI, ATPS4rpp, G6PDH2r

0.17

23.16

b4025, b3734, b3733, b3736, b3732, b3737, b3731, b3738, b3739, b3735, b1852

–

Quadruple

PFL, ACALD, THD2pp, THD2pp

0.19

23.49

b0351, b1241, b0903, b3951, b2579, b3952, b3114, b0902, b1602, b2913

OBTFL, 'ALCD2x', 'ALCD19'