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Table 1 List of differentially regulated genes in the SLCG_7083 deletion strain ST708 compared to original strain SyBE2901

From: PAS domain containing regulator SLCG_7083 involved in morphological development and glucose utilization in Streptomyces lincolnensis

Gene_id

readcount

log2Fold

Change

pval

Description

ID/SM (%)

Origin (Protein Accession number)

EC number

SyBE2901

ST708

sporulation/cell division

SLCG_3180

86.19

482.35

2.48

0.001449

serine/threonine-protein phosphatase, Stage II sporulation protein E

92/94

Streptomyces mirabilis, WP_051959054.1

3.1.3.16

SLCG_4162

44.90

142.23

1.66

0.033498

SsgA, sporulation/cell division regulator

94/97

Streptomyces viridochromogenes, WP_003999767.1

/

Carbohydrate Metabolism

SLCG_5038

193.14

48.67

-1.99

0.014015

Phosphohexomutase/phosphatase

84/86

Streptomyces cyaneochromogenes, WP_126392030.1

3.1.3.-

SLCG_5041

335.16

118.03

-1.51

0.017798

cyclitol dehydrogenase

84/90

Streptomyces griseofuscus, WP_125212155.1

1.1.1.-

Lipid transport and metabolism

SLCG_5215

213.11

825.51

1.95

0.040887

short-chain acyl-CoA dehydrogenase

96/98

Streptomyces hokutonensis, WP_019065764.1

1.3.99.12

SLCG_5739

241.29

698.13

1.53

0.043582

acetyl-CoA acetyltransferase

98/99

Streptomyces canus, WP_062042393.1

2.3.1.9

SLCG_7149

203.80

547.39

1.43

0.015251

acyl-CoA transferases

88/94

Streptomyces cyaneus, WP_128437098.1

2.8.3.-

SLCG_7150

91.39

272.56

1.58

0.022388

long-chain specific acyl-CoA dehydrogenase

94/97

Streptomyces fulvoviolaceus, WP_030600429.1

1.3.99.3

SLCG_7151

360.65

816.15

1.18

0.031986

acetyl-CoA acetyltransferase

98/99

Streptomyces curacoi, WP_062147083.1

2.3.1.9

SLCG_7152

467.97

989.21

1.08

0.038871

fatty acid oxidative multifunctional enzyme

92/96

Streptomyces fulvoviolaceus, WP_030600433.1

1.1.1.35 4.2.1.17 5.1.2.3