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Table 4 Variable sgRNA targets custom-designed in this study

From: Engineering the synthetic β-alanine pathway in Komagataella phaffii for conversion of methanol into 3-hydroxypropionic acid

Target name

Locus

Sequence (5′→3′)

Expression cassette

pTEF1-αUP_sgRNA1

PP7435_Chr1-1535

AACAACACTAAACTACCTTG

PFDH1_BAPATBc_ScCYC1tt

pTEF1-αUP_sgRNA2

TTAAGGATGTGTAGTGTCAA

pFLD1UP_sgRNA1

PP7435_Chr3-0140

TGCTAATGGTAGTTATCCAA

PPOR1-YDFGEc-TDH3tt

PPDC1-YDFGEc-TDH3tt

pFLD1UP_sgRNA2

CTATAGGATAAAAACAGGAG

RGI2_sgRNA1

PP7435_Chr1-0725

TCTCAACGTATTTATATGGT

PAOX1-PANDTc-RPS3tt

RGI2_sgRNA2

ATGAAGCCACTTCAACTACG

pGAPUP_sgRNA1

PP7435_Chr2-0858

ATCGATAATAGTCGCATGTG

PAOX1-PANDTc-RPS3tt

pGAPUP_sgRNA2

CGTTAGGTCAGTGATGACAA

pAOX1UP_sgRNA1

PP7435_Chr4-0130

ATTGTGAAATAGACGCAGAT

PFDH1-FDH(V9)Pse-TDH3tt

pAOX1UP_sgRNA2

GCAGTCGATCTCAAAAGCAA

  1. The sgRNA target used for each genomic insertion is highlighted in bold