Table 3 Overview of genes that are differentially expressed in the L. plantarum strain harboring pNZ7026 when compared to the control strain (pNZ7021)
From: Physiological responses to folate overproduction in Lactobacillus plantarum WCFS1
| Â | Â | Continuous culture | Batch culture | ||
|---|---|---|---|---|---|
Synonyms | Sub class | log2 ratio | Holmes sign. | log2 ratio | Holmes sign. |
rhe1 | ATP dependent RNA helicase | -0.38 | 1.00 | -1.59 | 0.07 |
mtsC | Cations | 1.33 | 0.00 | -0.01 | 1.00 |
mtsB | Cations | 1.43 | 0.00 | -0.02 | 1.00 |
mtsA | Cations | 1.46 | 0.00 | -0.07 | 1.00 |
pyrP | Nucleoside, purines and pyrimidines | 0.19 | 1.00 | 1.89 | 0.02 |
Lp_2696 | Conserved: membrane proteins | 0.04 | 1.00 | 1.32 | 0.07 |
pyre | Pyrimidine ribonucleotide biosynthesis | 0.15 | 1.00 | 2.84 | 0.07 |
pyrF | Pyrimidine ribonucleotide biosynthesis | 0.14 | 1.00 | 2.73 | 0.01 |
pyrD | Pyrimidine ribonucleotide biosynthesis | 0.14 | 1.00 | 2.75 | 0.00 |
pyrAB | Pyrimidine ribonucleotide biosynthesis | 0.11 | 1.00 | 2.74 | 0.00 |
pyrC | Pyrimidine ribonucleotide biosynthesis | 0.14 | 1.00 | 3.04 | 0.00 |
pyrB | Pyrimidine ribonucleotide biosynthesis | 0.08 | 1.00 | 2.88 | 0.00 |
pyrR1 | Other | -0.06 | 1.00 | 2.01 | 0.00 |
ansB | Glutamate familiy | -0.16 | 1.00 | -1.37 | 0.08 |
mntH2 | Cations | 1.28 | 0.00 | 0.45 | 1.00 |
folP | Folate biosynthesis | -5.50 | 0.00 | -5.86 | 0.00 |
Xtp2 | Folate biosynthesis | -5.31 | 0.00 | -6.28 | 0.00 |
folC2 | Folate biosynthesis | -5.85 | 0.00 | -6.44 | 0.00 |
folE | Folate biosynthesis | -5.36 | 0.00 | -6.41 | 0.00 |
folK | Folate biosynthesis | -5.80 | 0.00 | -6.47 | 0.00 |
folB | Folate biosynthesis | -5.54 | 0.00 | -6.21 | 0.00 |
Lp_3412 | Cell surface proteins: other | -1.53 | 0.01 | -0.28 | 1.00 |
Lp_3413 | Cell surface proteins: other | -1.93 | 0.00 | -0.37 | 1.00 |
Lp_3414 | Cell surface proteins: other | -2.10 | 0.00 | -0.43 | 1.00 |
Lp_3415 | Other | -1.17 | 0.00 | -0.72 | 0.72 |