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Figure 6 | Microbial Cell Factories

Figure 6

From: Experimental evidence and isotopomer analysis of mixotrophic glucose metabolism in the marine diatom Phaeodactylum tricornutum

Figure 6

100% 2-13C glycerol ILE shows that glycine and serine are predominantly synthesized from glyoxylate rather than 3-phosphoglycerate. Feeding 2-13C glycerol to Pt confirmed the MPA prediction that the MIDs of glycine and serine do not represent the labeling of 3-phosphoglycerate as is usual in many organisms. Were this the case, the majority of the 13C label from 2-13C glycerol would appear on the C-2 of glycine and serine, contradicting observation. The observed isotope labeling patterns in serine and glycine can be explained as follows. First, 2-13C glycerol is metabolized to pyruvate and alanine. Carbon rearrangements in the TCA cycle (gray) and back-mixing through anaplerotic reactions and the pentose phosphate pathway account for the small amount of label on alanine{1}. As 3-phosphoglycerate and pyruvate are closely linked to one-another, their MID’s are assumed to be identical. The high abundance of the glycine{1 2} and serine{1 23} result from the conversion of pyruvate to acetyl-CoA and glyoxylate. Aminotransferases convert glyoxylate to glycine, which then combines with MTHF to form serine via SHMT. A linear combination of the fluxes from alanine to serine and (glycine + MTHF) to serine produced a set of isotopomers that exactly matched the measured values when the SHMT reaction contributed 91% of the total flux and phosphoserine transaminase contributed 9% of the flux. Arrow widths correspond to relative fluxes. See text for isotopomer notation.

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