Skip to main content

Table 1 SNP in re-sequence ZM532 by comparing previous published ten genome-shuffled mutant strain and Z. mobilis ZM4 (GenBank: AE008692.2)

From: Molecular mechanism of engineered Zymomonas mobilis to furfural and acetic acid stress

Locus

Refa

Previousb

Currentc

Status

Ten genome shuffledd

Gene/Product

CDS

      

51,967

C

T

T

Confirmed

+

ZMO_RS00235/glutamine-fructose-6-phosphate aminotransferase

590,452

G

A

A

Confirmed

+

ZMO_RS02620/DNA repair protein Rad A

849,208

C

T

T

Confirmed

+

ZMO_RS03765/arginine-tRNA ligase

849,311

C

A

A

Confirmed

+

 

971,308

A

G

–

No SNP found

−

ZMO_RS09165/1S5/1S1182 family transposase

971,369

A

G

–

No SNP found

−

 

Intergenic regions

    

971,059

T

A

A

Confirmed

+

ZMO_RS09160–ZMO_RS09165

971,715

C

–

T

New SNP

+

 

971,717

T

–

G

New SNP

+

 

975,503

T

G

G

Confirmed

+

ZMO_RS04290–ZMO_RS04295

975,506

G

A

A

Confirmed

+

Monofunctional biosynthetic peptidoglycan

975,509

C

T

T

Confirmed

+

Transglycosylase/cytochrome c

975,523

C

T

T

Confirmed

+

 

975,525

A

T

T

Confirmed

+

 

975,528

T

G

G

Confirmed

+

 

975,532

A

T

T

Confirmed

+

 

975,537

A

C

C

Confirmed

+

 

975,540

G

T

T

Confirmed

+

 

975,544

A

–

G

New SNP

+

 

975,545

G

–

A

New SNP

+

 

975,547

T

G

G

Confirmed

+

 

975,899

T

 

C

New SNP

+

ZMO_RS04295

1,612,575

G

A

–

No SNP found

−

ZMO_RS07065–ZMO_RS07070

1,612,744

G

–

A

New SNP

+

Alpha/betahydrolase/Trna-Met

2,055,763

T

C

C

Confirmed

+

ZMO_RS09095-END

2,055,333

G

–

A

New SNP

+

Uroporphyrinogen decarboxylase/END

  1. aReference genome ZM4
  2. bWang et al. [16]
  3. cCurrent study with ZM532 strain
  4. d ± indicate the presence/absence of variation in the genome, respectively