Fig. 7
Differential gene expression analysis of the evolved Y. lipolytica strains. a Multidimensional scaling plot (MDS), for all libraries using all non-zero gene FPKMs. Biological replicates are shown in the same color. b UpSet plot, visualizing intersections between the sets of differentially expressed genes (DEGs) for the selected evolved strains compared to the parental (WTpar). The height of the bar indicates the number of DEGs included in each intersection for one or more evolved strains. The dark dots under each bar show which evolved strains are considered for each intersection. Empty intersections are not shown in the plot.