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Table 2 Oligonucleotides used in this study

From: Enhanced protein translocation to mammalian cells by expression of EtgA transglycosylase in a synthetic injector E. coli strain

Name

Sequence (5′–3′)a

Purpose

F_NotI_etgA

GCTTTGCGGCCGCATATTGAGTAACAACGTAAAAATGAAAAAAATAATACTGAGTATCATTCTC

Cloning of the etgA gene

R_SpeI_etgA

GTGACACTAGTTTAATCGATAATTTGCTCATTATTCTTTAA

Cloning of the etgA gene

F_SacI_RBS_EspF20

AATTCGAGCTCAAGCTTAAGAAGGAGATATACATATGCTTAATGGAATTAGTAACGCTGCTTC

Cloning of EspF20-bla

F_SacI_HindIII_bla

ATGCTGAGCTCAAGCTTAAGAAGGAGATATACATATGGGAAGCCACCCAGAAACGCTGGTGAAAGTAAAAG

Cloning of Bla

R_SpeI_Bla

CATGCACTAGTTTACCAATGCTTAATCAGTGAGGCACC

Cloning of EspF20-bla and Bla

Int_UP_sfm

TTCTTCACAAGCCTTGCGTTTGCTTGCGAC

Check etgA integration

F.check.DescN

CGGCGTACAAGAAACGCGTTATTTG

Check escN deletion

R.check.DescN

CGAAAACATAGTCTTTTTTATG

Check escN deletion

tolC-kmUP

ATGAAGAAATTGCTCCCCATTCTTATCGGCCTGAGCCTTTCTGGGTTCAGgtgtaggctggagctgcttc

Deletion of tolC

tolC-KmDWN

TCAGTTACGGAAAGGGTTATGACCGTTACTGGTGGTAGTGCGTGCGGATGcatatgaatatcctccttagt

Deletion of tolC

TolC-UP-1

CGGGAATTCTCTAGACTGCTTCACCACAAGGAATGCAAATG

Check tolC::km1

TolC-DW-1

CCGCGGATCCAAGCTTGGCCGAAGCCCCGTCGTCGTCATCA

Check tolC::km1

k2

CGGTGCCCTGAATGAACTGC

Check tolC::km1

  1. aRestriction sites used for cloning are underlined