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Fig. 4 | Microbial Cell Factories

Fig. 4

From: GC/MS-based 13C metabolic flux analysis resolves the parallel and cyclic photomixotrophic metabolism of Synechocystis sp. PCC 6803 and selected deletion mutants including the Entner-Doudoroff and phosphoketolase pathways

Fig. 4

In vivo flux distribution of Synechocystis 6803 during photomixotrophic growth on glucose and CO2 determined by GC–MS based 13C metabolic flux analysis. Fluxes are normalized to the glucose uptake (100%, 0.421 mmol g−1 h−1). The thickness of the arrows denotes the amount of flux. The errors for the fluxes reflect standard deviations, estimated by Monte-Carlo simulation. The anabolic fluxes into biomass are shown as triangles. The complete flux data set is given in Additional file 1: Table S2, where also the 95% confidence intervals from the Monte-Carlo analysis are provided. GLC_ex extracellular glucose; G6P glucose 6-phosphate; F6P fructose 6-phosphate; DHAP dihydroxyacetone phosphate; GAP glyceraldehyde 3-phosphate; 3PG 3-phosphoglycerate; PEP phosphoenolpyruvate; PYR pyruvate; AcCoA acetyl coenzyme A; ICI isocitrate; 2OG 2-oxoglutarate; SucA succinate-semialdehyde; SUC succinate; FUM fumarate; MAL malate; OAA oxaloacetate; 6PG 6-phosphogluconate; KDPG 2-keto-3-deoxy-6-phosphogluconate; Ri5P ribose 5-phosphate; Ru5P ribulose 5-phosphate; X5P xylose 5-phosphate; S7P sedoheptulose 7-phosphate; E4P erythrose 4-phosphate; CO2_EX extracellular carbon dioxide; CO2 intracellular carbon dioxide. The flux estimation yielded an excellent quality of fit for the considered mass isotopomers of amino acids, sugars, and sugar derivatives (Additional file 1: Table S1). The variance-weighted sum of squared residuals (SSR) was 377 and within the expected range (342–434) of the chi-square test at 95% confidence level, confirming also statistical acceptability (Additional file 1: Fig. S8). n = 4

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