Fig. 4From: GC/MS-based 13C metabolic flux analysis resolves the parallel and cyclic photomixotrophic metabolism of Synechocystis sp. PCC 6803 and selected deletion mutants including the Entner-Doudoroff and phosphoketolase pathwaysIn vivo flux distribution of Synechocystis 6803 during photomixotrophic growth on glucose and CO2 determined by GC–MS based 13C metabolic flux analysis. Fluxes are normalized to the glucose uptake (100%, 0.421 mmol g−1 h−1). The thickness of the arrows denotes the amount of flux. The errors for the fluxes reflect standard deviations, estimated by Monte-Carlo simulation. The anabolic fluxes into biomass are shown as triangles. The complete flux data set is given in Additional file 1: Table S2, where also the 95% confidence intervals from the Monte-Carlo analysis are provided. GLC_ex extracellular glucose; G6P glucose 6-phosphate; F6P fructose 6-phosphate; DHAP dihydroxyacetone phosphate; GAP glyceraldehyde 3-phosphate; 3PG 3-phosphoglycerate; PEP phosphoenolpyruvate; PYR pyruvate; AcCoA acetyl coenzyme A; ICI isocitrate; 2OG 2-oxoglutarate; SucA succinate-semialdehyde; SUC succinate; FUM fumarate; MAL malate; OAA oxaloacetate; 6PG 6-phosphogluconate; KDPG 2-keto-3-deoxy-6-phosphogluconate; Ri5P ribose 5-phosphate; Ru5P ribulose 5-phosphate; X5P xylose 5-phosphate; S7P sedoheptulose 7-phosphate; E4P erythrose 4-phosphate; CO2_EX extracellular carbon dioxide; CO2 intracellular carbon dioxide. The flux estimation yielded an excellent quality of fit for the considered mass isotopomers of amino acids, sugars, and sugar derivatives (Additional file 1: Table S1). The variance-weighted sum of squared residuals (SSR) was 377 and within the expected range (342–434) of the chi-square test at 95% confidence level, confirming also statistical acceptability (Additional file 1: Fig. S8). n = 4Back to article page