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Fig. 8 | Microbial Cell Factories

Fig. 8

From: Oral probiotic activities and biosafety of Lactobacillus gasseri HHuMIN D

Fig. 8

Functional categories based on EggNog/COG of genome of L. gasseri HHuMIN D. Whole genome sequencing of L. gasseri HHuMIN D was performed by Chunlab, Inc. (Seoul, Korea), which used PacBio Sequel Systems (Pacific Biosciences, Menlo Park, CA, USA) and analyzed using CLgenomics™ and EZBioCloud Apps programs (Chunlab, Seoul, Korea). The function of each protein was found through homology comparison with NCBI's RefSeq Database, and functional categories were completed by synthesizing information such as COG classification by NCBI COG, SEED classification by FIGfam, and EC classification etc. The figure is a combination of the assignments of each COG and the functional category (25 categories, which are often designated from A to Z) using EggNog

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