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Table 1 Genomic characters of four representative model Streptomyces

From: Comprehensive dissection of dispensable genomic regions in Streptomyces based on comparative analysis approach

Streptomyces

S. albus J1074

S. coelicolor A3(2)

S. griseus NBRC 13350

S. avermitilis MA-4680

NCBI number

NC_020990

NC_003888.1

NC_010572.1

NC_003155.1

Genome size

6841649 bp

8667507 bp

8545929 bp

9025608 bp

Chromosome center

3420825 bp

4333754 bp

4272965 bp

4512804 bp

oriC location

3419111 bp-3420244 bp

4269844 bp-4270777 bp

4324371 bp-4325375 bp

5287934 bp-5289023 bp

oriC to center deviation

1147 bp(left)

63443 bp(left)

51909 bp(right)

775675 bp(right)

Core region

461493 bp-6274525 bp

1109358 bp-7552504 bp

1100483 bp-7490380 bp

1735832 bp-8475739 bp

BGCs count

22

30

38

36

BGCs size

971608 bp

994310 bp

1631915 bp

1510537 bp

BGCs distribution in sub-telomeric regions

54%

45%

52%

40%

GIs count

44

94

99

21

GIs size

411976 bp

1092300 bp

1270295 bp

594367 bp

GIs distribution in sub-telomeric regions

9.9%

46.7%

67.5%

77.5%

ISs count

53

107

75

173

ISs size

49359 bp

99533 bp

96856 bp

229749 bp

ISs distribution in sub-telomeric regions

16.1%

32.2%

45.4%

55.4%