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Table 3 Primers used in this study

From: Metabolic engineering and transcriptomic analysis of Saccharomyces cerevisiae producing p-coumaric acid from xylose

ID

Name

Sequence

Overexpression primers

 1691

Fj_TAL_1_fw

AGTGCAGGUAAAACAATGAACACCATCAACGAATATCTGAGC

 1692

Fj_TAL_1_rv

CGTGCGAUTTAATTGTTAATCAGGTG

 6785

Ec_aroL_2_fw

ATCTGTCAUAAAACAATGACACAACCTCTTTTTCTGA

 6786

Ec_aroL_2_rv

CACGCGAUTCAACAATTGATCGTCTGTGC

 1398

Sc_ARO7_1_fw

AGTGCAGGUAAAACAATGGATTTCACAAAACCAGAAAC

 1399

Sc_ARO7_1_rv

CGTGCGAUTCACTCTTCCAACCTTCTTAGCAAG

 1396

Sc_ARO4_2_fw

ATCTGTCAUAAAACAATGAGTGAATCTCCAATGTTCG

 1397

Sc_ARO4_2_rv

CACGCGAUTCATTTCTTGTTAACTTCTCTTCTTTG

Verification primers

 904

Sc_X-3-out-seq_rv

CCGTGCAATACCAAAATCG

 906

Sc_X-4-out-seq_rv

GACGGTACGTTGACCAGAG

 912

XI-3- down-out_rv

CACATTGAGCGAATGAAACG

 2220

Sc_ColoPCR_fw

CCTGCAGGACTAGTGCTGAG

 1384

Sc_PDC5_Start_fw

AAAGCCTCCATATCCAAAG

 1385

Sc_PDC5_End_rv

AGGTATGGTTAAAGATCACAC

 1386

Sc_ARO10_Start_fw

ACCGAAATTTAAAAAAGCAG

 1387

Sc_ARO10_End_rv

GTTTTCGGATAAAACTTCTTC

Knockout primers

 1368

Pdc5 _UP_fw

CGTAAACCTGCATTAAG 

 1369

Pdc5 _UP_rv

GATCCCCGGGAATTGCCATTGTGTTGTTCTCTTTG

 1370

Pdc5_END_fw

GGTACCCAATTCGCCCTAGATTCAACGTTTGTGTA

 1371

Pdc5_END_rv

CTAAGATCATAGCTAAAGG

 1372

Aro10_UP_fw

GGATAGCCGTCATTTAC

 1373

Aro10_UP_rv

GATCCCCGGGAATTGCCAGAGGGTTGATCAGTTAAA

 1374

Aro10_END_fw

GGTACCCAATTCGCCCTACTACCAATTGTTCGTTT

 1375

Aro10_END_rv

CGATAGGAATGACAGAA

 476

KanMX_UP_fw

TGGCAATTCCCGGGGATCACGCTGC AGGTCGACAAC

 477

KanMX_UP_rv

AGTGACGACTGAATCCGGTG

 478

KanMX_END_fw

AATGGGCTCGCGATAATGTC

 479

KanMX_END_rv

TAGGGCGAATTGGGTACCGCCACTAGTGGA TCTGATATCAC

 150

LEU_UP_rv

CAGAAGCATAACTACCCATTCC

 151

LEU_END_Fw

TGGAAGAGGCAAGCACGTTAGC

 92

URA3_2/3_START_rv

CGCTTCCCATCCAGCATTTC

 93

URA3_2/3_END_fw

CTGTCGTTCCATTGAAAGC