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Table 2 Expression, at the transcript level, of putative pectate lyase- and polygalacturonase-encoding genes from Tetracladium sp

From: Pectinase secreted by psychrotolerant fungi: identification, molecular characterization and heterologous expression of a cold-active polygalacturonase from Tetracladium sp.

Putative CDS Expression (FPKM) P/Ga
YM-G YM-P  
PL scaffold_4.g450.t1 3.6 0.8 − 4
PL scaffold_5.g260.t1 22.9 6.5 − 4
PL scaffold_4.g243.t1 2.2 0.8 − 3
PL scaffold_2.g1041.t1 2.4 0.9 − 3
PL scaffold_0.g2020.t1 5.6 3.3 − 2
PL scaffold_1.g759.t1 6.5 4.2 − 2
PL scaffold_1.g52.t1 29.9 22.0 − 1
PL scaffold_0.g2289.t1 1.1 0.8 − 1
PL scaffold_11.g858.t1 26.0 45.2 2
PL scaffold_7.g463.t1 7.0 15.0 2
PL scaffold_3.g58.t1 18.0 60.9 3
PL scaffold_0.g2293.t1 5.5 19.7 4
PG scaffold_3.g273.t1 1.6 11.8 7
PG scaffold_3.g424.t1 19.1 243.4 13
PL scaffold_2.g849.t1 2.6 74.9 28
PG scaffold_3.g812.t1 0.6 66.3 112
PL scaffold_3.g812.t1 0.6 66.3 112
PG scaffold_0.g606.t1 3.9 1012.9 258
PG scaffold_3.g1104.t1 1.0 291.1 288
PG scaffold_10.g413.t1 0.1 1762.5 12,228
PG scaffold_6.g590.t1 0.0 566.6 12,360
  1. Expression in medium supplemented with glucose (YM-G) or pectin (YM-P). PL pectate lyase, PG polygalacturonase. aExpression fold changes between cultures in YM-P (P) and YM-G (G) media