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Table 1 Genome characteristics of Alternaria sp. MG1

From: Genomic sequencing, genome-scale metabolic network reconstruction, and in silico flux analysis of the grape endophytic fungus Alternaria sp. MG1

General features

 Genome size (Mb)

34.7

 GC content (%)

50.96

 Number of scaffolds

132

 Scaffold N50 (bp)

1,661,510

 Number of contigs

1506

 Contig N50 (bp)

44,208

 Number of protein-coding sequences

13,606

Properties of gene annotation

 Number of rRNA genes

37

 Number of tRNA genes

129

 COG annotation

5037

 GO annotation

6602

 KAAS annotation

2663

 KOG annotation

6413

 Pfam annotation

8955

 Swissprot annotation

8330

 TrEMBL annotation

13,055

 Nr annotation

13,045

 Nt annotation

10,080

 Total

13,088