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Fig. 8 | Microbial Cell Factories

Fig. 8

From: Carbon sources and XlnR-dependent transcriptional landscape of CAZymes in the industrial fungus Talaromyces versatilis: when exception seems to be the rule

Fig. 8

Heterogeneity of expression data within functional categories. a 11 GOIs encoding cellulases and b 10 genes encoding arabinofuranosidases, in response to five selected carbon sources (coloured code). Left scatter plot: log2 (FC) values, (i.e. shift from glucose to the medium of interest as in Fig. 2), as a function of the relative quantities of transcript levels (RQs), in the wild type strain. Right scatter plot: log2 (FC) values in the xlnR+ strain as a function of log2 (FC) values in the ΔxlnR strain. RQs were calculated using as reference the ‘GOI-condition’ pair sample leading to the highest Cq value in the full set of data from this functional category of genes (i.e. lower transcript level). No symbol drawn at RQ of 1 for the arabinofuranosidases category (b), as the culture condition leading to the lowest expression within this group of genes was not plotted (i.e. 5 conditions plotted amongst the 12 used for calculation)

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