Table 1 Summary of CodeML results for branch-site analyses for aidP genes and 42 homologous gene obtained from NCBI BLAST result
From: Characterization of a novel N-acylhomoserine lactonase, AidP, from Antarctic Planococcus sp.
| Model | Site class | Proportion | Background ω | Foreground ω | lnL | LRT Statistic | *p-value |
|---|---|---|---|---|---|---|---|
| Branch-site Null | 0 | 0.89838 | 0.02528 | 0.02528 | − 11,269.67116 | 4.42473 | 0.035422 |
| 1 | 0.01171 | 1.000 | 1.000 | ||||
| 2a | 0.08875 | 0.02528 | 1.000 | ||||
| 2b | 0.00116 | 1.000 | 1.000 | ||||
| Branch-site Alternative Model | 0 | 0.91669 | 0.02528 | 0.02528 | − 11,267.458798 | ||
| 1 | 0.01197 | 1.000 | 1.000 | ||||
| 2a | 0.07041 | 0.02528 | 38.61239 | ||||
| 2b | 0.00092 | 1.000 | 38.61239 |