From: Enhanced biosynthesis of phenazine-1-carboxamide by engineered Pseudomonas chlororaphis HT66
Gene | Fold change in expressiona | Descriptionb | ||
---|---|---|---|---|
HT66ΔrpeA | HT66ΔpsrA | HT66ΔrpeAΔpsrA | ||
gacA | 1.24 (0.72 to 1.75) | 2.78 (2.09 to 3.68) | 1.19 (− 1.17 to 1.67) | Response regulator |
gacS | 2.08 (1.78 to 2.37) | 1.17 (0.71 to 1.69) | 1.48 (1.04 to 2.1) | Sensor protein |
rpeA | – | 3.52 (2.75 to 5.04) | – | Sensor kinase |
rpeB | 2.39 (1.83 to 2.94) | 11.58 (8.27 to 16.22) | 5.06 (4.96 to 6.56) | Response regulator |
psrA | − 3.82 (− 3.49 to − 4.15) | – | – | Pseudomonas sigma regulator |
rpoS | 1.06 (0.68 to 1.43) | 1.53 (1.21 to 1.93) | − 1.13 (− 1.58 to 1.23) | RNA polymerase sigma factor |
pip | 4.43 (3.78 to 5.08) | 1.46 (1.14 to 1.88) | 3.56 (2.58 to 4.9) | Phenazine-inducing protein |
phzI | 10.01 (9.71 to 10.31) | 2.73 (2.55 to 2.93) | 29.65 (21.55 to 40.79) | Autoinducer synthase |
phzR | 1.03 (0.43 to 1.63) | − 1.06 (− 1.29 to 1.14) | 6.06 (4.24 to 8.67) | Transcriptional activator protein |
phzE | 4.15 (3.44 to 4.86) | 3.33 (3.09 to 3.59) | 16.53 (11.96 to 22.83) | Phenazine biosynthesis protein |