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Table 1 The designed spacer sequences based on the promoter of epothilone gene cluster

From: CRISPR/dCas9-mediated transcriptional improvement of the biosynthetic gene cluster for the epothilone production in Myxococcus xanthus

Name

Spacer

Coding strand

Location

Off-target predictiona

Epoact1

TGGCCCTTTGAGGGGCTGGC

+

95 bp from TSS1

148 bp from TSS2

145

Epoact2

TCGCGCGATATCGTCGACCC

–

93 bp from TSS1

146 bp from TSS2

21

Epoact3

TTACCCTCGGGGAATTGACT

–

67 bp from TSS1

120 bp from TSS2

9

Epoact4

CATGAAAATGGCCCTTTGAG

+

103 bp from TSS1

156 bp from TSS2

20

Epoact5

TCTCCCAGTCAATTCCCCGA

+

53 bp from TSS1

106 bp from TSS2

18

  1. aThe potential off-target sites in the genome of M. xanthus DK1622