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Table 2 Oligonucleotides used in this study

From: Rapid conjugative mobilization of a 100 kb segment of Bacillus subtilis chromosomal DNA is mediated by a helper plasmid with no ability for self-transfer

Oligonucleotides

Sequences (5′→3′)

spc-F

GAGTCAGAAAACAGACGCATAAACGCTAACGGTCAGC

spc-R

CTAATACCGTTCCCCGAGAAGCTTCACTAAATTAAAGTAATAAAGC

comK-uF

AGAGCGTAAGAAACGCATC

comK-uR

TGCGTCTGTTTTCTGACTC

comK-dF

CTCGGGGAACGGTATTAG

comK-dR

CGAAGATCTGCCTACTGAAC

oriT-uF

TAAATAACATGACTGTGGAAATGAC

oriT-uR

GCTTGAGTCAATTCCGCTGTCGTTAGTCTTCGATGACGAGATTG

oriT-dF

CTGATTGGGTAGGATCCCCGAGAAAGAGCAATCTCGTCATCGAAGACTAAAAAAAGAAACACTTATTTGAACAGATC

oriT-dR

GCGTCTTCTTAAAACGCTG

mazF-F

CGACAGCGGAATTGACTCAAGC

mazF-R

CGGGGATCCTACCCAATCAG

oriT-F

AAAGAGCAATCTCGTCATCGAAGACTAAATTTC

oriT-R

TTGTTAACGCTCCTTTTCATCGATTTCTG

erm-F1

CAGAAATCGATGAAAAGGAGCGTTAACAAGAGTGTGTTGATAGTGCAGTATC

erm-F2

GAAATTTAGTCTTCGATGACGAGATTGCTCTTTGAGTGTGTTGATAGTGCAGTATC

erm-R

CTACATTCCCTTTAGTAACGTGTAAC

yhfM-uF

GATCGTGAAAGGCCCCAATGTG

yhfM-uR1

GAAATTTAGTCTTCGATGACGAGATTGCTCTTTGAAGCAAAGGATTGAAAATGAAAAAGCG

yhfM-uR2

CAGAAATCGATGAAAAGGAGCGTTAACAAGAAGCAAAGGATTGAAAATGAAAAAGCG

yhfM-dF

GTTACACGTTACTAAAGGGAATGTAGCACTATTTTTTTCATTTGCATCACTCCAAAC

yhfM-dR

ATCAGCGAAAGCACAAACACAAAACC

yhfK-uF

ATGATAAAATGACCACCGAAGAATTCCG

yhfK-uR1

GAAATTTAGTCTTCGATGACGAGATTGCTCTTTCACTTTCATGTGAATCCCTCCTGCC

yhfK-dF

GTTACACGTTACTAAAGGGAATGTAGGAAACTATGACAGTACTGACACTCAGGGC

yhfK-dR

GACGAGCTCAACCTTTGGCAGC

yhfC-uF

GCCAAATGGAGGCCGTATGTCAG

yhfC-uR1

GAAATTTAGTCTTCGATGACGAGATTGCTCTTTTGACCATTTTTCAGCCTCCTTTTTCTTTTTC

yhfC-dF

GTTACACGTTACTAAAGGGAATGTAGGATTGTAAAAGCAAAAAGGGTGTTTCAATAAAAGG

yhfC-dR

GGCTTGGGATCGATACAAGTTCTTTAATGAG

yhcT-uF

TTCGGGGACGAAAAATAGCACAGATC

yhcT-uR1

GAAATTTAGTCTTCGATGACGAGATTGCTCTTTCTGCTGATATGAAAAACCTTTGCCG

yhcT-dF

GTTACACGTTACTAAAGGGAATGTAGAGCCCTCTGCCTTTTTGGTTCATG

yhcT-dR

GCTTTGTTAGTCTTCTTTTGAAAGTCAGAAAAAGC