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Table 1 Bacterial strains and plasmids used in this study

From: Metabolic network model guided engineering ethylmalonyl-CoA pathway to improve ascomycin production in Streptomyces hygroscopicus var. ascomyceticus

Strains/plasmids

Relevant features

Source/reference

Strains

 S. hygroscopicus var. ascomyceticus FS35

Mutant, improved ascomycin producer

[7]

 FS-PIB

FS35 transformed with pIB139

This study

 HA-Ccr

FS35 transformed with pIB/ccr

This study

 HA-Hcd

FS35 transformed with pIB/hcd

This study

 HA-Hcd-Ccr

FS35 transformed with pIB/hcd/ccr

This study

 E. coli DH5α

Plasmid construction and general cloning

Takara

 E. coli ET12567

pUZ8002, nonmethylating plasmid donor, CmR, KanR

[40]

Plasmids

 pUC18

E. coli general cloning vector, AmpR

[41]

 pIB139

Integrative E. coli-Streptomyces shuttle plasmid containing oriT, attP, int, aac(3)IV and ermEp*

[42]

 pIB/ccr

pIB139 based integrative plasmid containing ccr gene, AprR

This study

 pIB/hcd

pIB139 based integrative plasmid containing hcd gene, AprR

This study

 pUC/hcd

pUC18 based plasmid containing hcd gene

This study

 pUC/hcd/ccr

pUC18 based plasmid containing hcd and ccr gene

This study

 pIB/hcd/ccr

pIB139 based integrative plasmid containing hcd-ccr gene, AprR

This study