Table 1 Sequencing data size and output quality in YYH13 and YYH16
From: Genomics insights into different cellobiose hydrolysis activities in two Trichoderma hamatum strains
Type | YYH13 Raw data | YYH13 Clean data | YYH16 Raw data | YYH16 Clean data |
|---|---|---|---|---|
Number of reads | 62,431,080 | 58,834,452 | 20,861,707 | 19,051,316 |
Data size | 12,486,216,000 | 11,766,890,400 (94.24%) | 4,172,341,400 | 3,810,263,200 (91.32%) |
N of fq1 | 0.00% | 0.00% | 0.02% | 0.01% |
N of fq2 | 0.01% | 0.00% | 0.06% | 0.00% |
Low qual base of fq1: (≤5) | 2.73% | 0.90% | 4.13% | 1.61% |
Low qual base of fq2: (≤5) | 5.07% | 1.46% | 6.79% | 1.88% |
Q20 of fq1 | 95.93% | 98.03% | 93.11% | 96.21% |
Q20 of fq2 | 92.60% | 96.63% | 90.70% | 95.80% |
Q30 of fq1 | 91.76% | 94.25% | 85.60% | 89.43% |
Q30 of fq2 | 87.71% | 91.87% | 83.15% | 88.23% |
GC of fq1 | 45.24% | 45.04% | 45.14% | 44.86% |
GC of fq2 | 45.10% | 44.92% | 45.04% | 44.76% |
Error of fq1 | 0.03% | 0.03% | 0.05% | 0.04% |
Error of fq2 | 0.04% | 0.03% | 0.06% | 0.04% |
Discarded reads related to N and low qual | 5.76% | 8.68% |