TY - JOUR AU - Kunze, G. AU - Gaillardin, C. AU - Czernicka, M. AU - Durrens, P. AU - Martin, T. AU - Böer, E. AU - Gabaldón, T. AU - Cruz, J. A. AU - Talla, E. AU - Marck, C. AU - Goffeau, A. AU - Barbe, V. AU - Baret, P. AU - Baronian, K. AU - Beier, S. AU - Bleykasten, C. AU - Bode, R. AU - Casaregola, S. AU - Despons, L. AU - Fairhead, C. AU - Giersberg, M. AU - Gierski, P. P. AU - Hähnel, U. AU - Hartmann, A. AU - Jankowska, D. AU - Jubin, C. AU - Jung, P. AU - Lafontaine, I. AU - Leh-Louis, V. AU - Lemaire, M. AU - Marcet-Houben, M. AU - Mascher, M. AU - Morel, G. AU - Richard, G. F. AU - Riechen, J. AU - Sacerdot, C. AU - Sarkar, A. AU - Savel, G. AU - Schacherer, J. AU - Sherman, D. J. AU - Stein, N. AU - Straub, M. L. AU - Thierry, A. AU - Trautwein-Schult, A. AU - Vacherie, B. AU - Westhof, E. AU - Worch, S. AU - Dujon, B. AU - Souciet, J. L. AU - Wincker, P. AU - Scholz, U. AU - Neuvéglise, C. PY - 2014 DA - 2014// TI - The complete genome of Blastobotrys (Arxula) adeninivorans LS3—a yeast of biotechnological interest JO - Biotechnol Biofuels VL - 7 UR - https://doi.org/10.1186/1754-6834-7-66 DO - 10.1186/1754-6834-7-66 ID - Kunze2014 ER - TY - JOUR AU - Rohn, H. AU - Junker, A. AU - Czauderna, T. AU - Hartmann, A. AU - Klapperstück, M. AU - Treutler, H. AU - Grafahrend-Belau, E. AU - Klukas, C. AU - Schreiber, F. PY - 2012 DA - 2012// TI - VANTED v2: a framework for systems biology applications JO - BMC Syst Biol VL - 6 UR - https://doi.org/10.1186/1752-0509-6-139 DO - 10.1186/1752-0509-6-139 ID - Rohn2012 ER - TY - JOUR AU - Junker, A. AU - Rohn, H. AU - Czauderna, T. AU - Klukas, C. AU - Hartmann, A. AU - Schreiber, F. PY - 2012 DA - 2012// TI - Creating interactive, web-based and data-enriched maps using the systems biology graphical notation JO - Nat Protoc VL - 7 UR - https://doi.org/10.1038/nprot.2012.002 DO - 10.1038/nprot.2012.002 ID - Junker2012 ER - TY - JOUR AU - Lee, S. Y. AU - Park, J. H. AU - Jang, S. H. AU - Nielsen, L. K. AU - Kim, J. AU - Jung, K. S. PY - 2008 DA - 2008// TI - Fermentative butanol production by Clostridia JO - Biotechnol Bioeng VL - 101 UR - https://doi.org/10.1002/bit.22003 DO - 10.1002/bit.22003 ID - Lee2008 ER - TY - JOUR AU - Lee, J. AU - Jang, Y. S. AU - Choi, S. J. AU - Im, J. A. AU - Song, H. AU - Cho, J. H. AU - Seung, D. Y. AU - Papoutsakis, D. T. AU - Bennett, G. N. AU - Lee, S. Y. PY - 2011 DA - 2011// TI - Metabolic engineering of Clostridium acetobutylicum ATCC 824 for isopropanol-butanol-ethanol fermentation JO - Appl Environ Microbiol VL - 78 UR - https://doi.org/10.1128/AEM.06382-11 DO - 10.1128/AEM.06382-11 ID - Lee2011 ER - TY - JOUR AU - Steen, E. J. AU - Chan, R. AU - Prasad, N. AU - Myers, S. AU - Petzold, C. J. AU - Redding, A. AU - Ouellet, M. AU - Keasling, J. D. PY - 2008 DA - 2008// TI - Metabolic engineering of Saccharomyces cerevisiae for the production of n-butanol JO - Microb Cell Fact VL - 7 UR - https://doi.org/10.1186/1475-2859-7-36 DO - 10.1186/1475-2859-7-36 ID - Steen2008 ER - TY - JOUR AU - Atsumi, S. AU - Cann, A. F. AU - Connor, M. R. AU - Shen, C. R. AU - Smith, K. M. AU - Brynildsen, M. P. AU - Chou, K. J. AU - Hanai, T. AU - Liao, J. C. PY - 2008 DA - 2008// TI - Metabolic engineering of Escherichia coli for 1-butanol production JO - Metab Eng VL - 10 UR - https://doi.org/10.1016/j.ymben.2007.08.003 DO - 10.1016/j.ymben.2007.08.003 ID - Atsumi2008 ER - TY - STD TI - Kunze G, Hähnel U. Herstellung von Butanol durch Fermentation in Arxula sp. 2012; EP2508597A1. ID - ref8 ER - TY - JOUR AU - Auld, D. S. PY - 2001 DA - 2001// TI - Zinc coordination sphere in biochemical zinc sites JO - Biometals VL - 14 UR - https://doi.org/10.1023/A:1012976615056 DO - 10.1023/A:1012976615056 ID - Auld2001 ER - TY - JOUR AU - Auld, D. S. AU - Bergman, T. PY - 2008 DA - 2008// TI - Medium- and short-chain dehydrogenase/reductase gene and protein families: the role of zinc for alcohol dehydrogenase structure and function JO - Cell Mol Life Sci VL - 65 UR - https://doi.org/10.1007/s00018-008-8593-1 DO - 10.1007/s00018-008-8593-1 ID - Auld2008 ER - TY - JOUR AU - Ramaswamy, S. AU - Kratzer, D. A. AU - Hershey, A. D. AU - Rogers, P. H. AU - Arnone, A. AU - Eklund, H. AU - Plapp, B. V. PY - 1994 DA - 1994// TI - Crystallization and preliminary crystallographic studies of Saccharomyces cerevisiae alcohol dehydrogenase I JO - J Mol Biol VL - 235 UR - https://doi.org/10.1006/jmbi.1994.1031 DO - 10.1006/jmbi.1994.1031 ID - Ramaswamy1994 ER - TY - JOUR AU - Persson, B. AU - Hedlund, J. AU - Jörnvall, H. PY - 2008 DA - 2008// TI - Medium- and short-chain dehydrogenase/reductase gene and protein families: the MDR superfamily JO - Cell Mol Life Sci VL - 65 UR - https://doi.org/10.1007/s00018-008-8587-z DO - 10.1007/s00018-008-8587-z ID - Persson2008 ER - TY - JOUR AU - Levin, I. AU - Meiri, G. AU - Peretz, M. AU - Burstein, Y. AU - Frolow, F. PY - 2004 DA - 2004// TI - The ternary complex of Pseudomonas aeruginosa alcohol dehydrogenase with NADH and ethylene glycol JO - Protein Sci VL - 13 UR - https://doi.org/10.1110/ps.03531404 DO - 10.1110/ps.03531404 ID - Levin2004 ER - TY - JOUR AU - Bennetzen, J. L. AU - Hall, B. D. PY - 1982 DA - 1982// TI - The primary structure of the Saccharomyces cerevisiae gene for alcohol dehydrogenase JO - J Biol Chem VL - 257 ID - Bennetzen1982 ER - TY - JOUR AU - Russell, D. W. AU - Smith, M. AU - Williamson, V. M. AU - Young, E. T. PY - 1983 DA - 1983// TI - Nucleotide sequence of the yeast alcohol dehydrogenase II gene JO - J Biol Chem VL - 258 ID - Russell1983 ER - TY - JOUR AU - Young, E. T. AU - Pilgrim, D. PY - 1985 DA - 1985// TI - Isolation and DNA sequence of ADH3, a nuclear gene encoding the mitochondrial isozyme of alcohol dehydrogenase in Saccharomyces cerevisiae JO - Mol Cell Biol VL - 5 UR - https://doi.org/10.1128/MCB.5.11.3024 DO - 10.1128/MCB.5.11.3024 ID - Young1985 ER - TY - JOUR AU - Drewke, C. AU - Ciriacy, M. PY - 1988 DA - 1988// TI - Overexpression, purification and properties of alcohol dehydrogenase IV from Saccharomyces cerevisiae JO - Biochim Biophys Acta VL - 950 UR - https://doi.org/10.1016/0167-4781(88)90072-3 DO - 10.1016/0167-4781(88)90072-3 ID - Drewke1988 ER - TY - JOUR AU - Smith, M. G. AU - des Etages, S. G. AU - Snyder, M. PY - 2004 DA - 2004// TI - Microbial synergy via an ethanol-triggered pathway JO - Mol Cell Biol. VL - 24 UR - https://doi.org/10.1128/MCB.24.9.3874-3884.2004 DO - 10.1128/MCB.24.9.3874-3884.2004 ID - Smith2004 ER - TY - JOUR AU - Smidt, O. AU - Preez, J. C. AU - Albertyn, J. PY - 2008 DA - 2008// TI - The alcohol dehydrogenases of Saccharomyces cerevisiae: a comprehensive review JO - FEMS Yeast Res VL - 8 UR - https://doi.org/10.1111/j.1567-1364.2008.00387.x DO - 10.1111/j.1567-1364.2008.00387.x ID - Smidt2008 ER - TY - JOUR AU - Verduyn, C. AU - Breedveld, G. J. AU - Scheffers, W. A. AU - Dijken, J. P. PY - 1988 DA - 1988// TI - Substrate specificity of alcohol dehydrogenase from the yeast Hansenula polymorpha CBS4732 and Candida utilis CBS621 JO - Yeast VL - 4 UR - https://doi.org/10.1002/yea.320040208 DO - 10.1002/yea.320040208 ID - Verduyn1988 ER - TY - JOUR AU - Larroy, M. AU - Fernández, M. R. AU - González, E. AU - Parés, X. AU - Biosca, J. A. PY - 2002 DA - 2002// TI - Characterization of the Saccharomyces cerevisiae YMR318C (ADH6) gene product as a broad specificity NADPH-dependent alcohol dehydrogenase: relevance in aldehyde reduction JO - Biochem J VL - 361 UR - https://doi.org/10.1042/bj3610163 DO - 10.1042/bj3610163 ID - Larroy2002 ER - TY - JOUR AU - Larroy, C. AU - Parés, X. AU - Biosca, J. A. PY - 2002 DA - 2002// TI - Characterization of a Saccharomyces cerevisiae NADP(H)-dependent alcohol dehydrogenase (ADHVII), a member of the cinnamyl alcohol dehydrogenase family JO - Eur J Biochem VL - 269 UR - https://doi.org/10.1046/j.1432-1033.2002.03296.x DO - 10.1046/j.1432-1033.2002.03296.x ID - Larroy2002 ER - TY - JOUR AU - Holzer, H. PY - 1961 DA - 1961// TI - Regulation of carbohydrate metabolism by enzyme competition JO - Cold Spring Harbor Symp Quant Biol VL - 26 UR - https://doi.org/10.1101/SQB.1961.026.01.034 DO - 10.1101/SQB.1961.026.01.034 ID - Holzer1961 ER - TY - JOUR AU - Petrick, M. AU - Kappeli, O. AU - Fiechter, A. PY - 1983 DA - 1983// TI - An expanded concept for the glucose effect in the yeast Saccharomyces uvarum: involvement of short-term and long-term regulation JO - J Gen Microbiol VL - 129 ID - Petrick1983 ER - TY - JOUR AU - Hondmann, D. H. A. AU - Busink, R. AU - Witteveen, C. F. B. AU - Visser, J. PY - 1991 DA - 1991// TI - Glycerol catabolism in Aspergillus nidulans JO - J Gen Microbiol VL - 137 UR - https://doi.org/10.1099/00221287-137-3-629 DO - 10.1099/00221287-137-3-629 ID - Hondmann1991 ER - TY - JOUR AU - Cho, J. Y. AU - Jeffries, T. W. PY - 1998 DA - 1998// TI - Pichia stipitis genes for alcohol dehydrogenase with fermentative and respiratory functions JO - Appl Environ Microbiol VL - 64 ID - Cho1998 ER - TY - JOUR AU - Suwannarangsee, S. AU - Oh, D. B. AU - Seo, J. W. AU - Kim, C. H. AU - Rhee, S. K. AU - Kang, H. A. AU - Chulalaksananukul, W. AU - Kwon, O. PY - 2010 DA - 2010// TI - Characterization of alcohol dehydrogenase 1 of the thermotolerant methylotrophic yeast Hansenula polymorpha JO - Appl Microbiol Biotechnol VL - 88 UR - https://doi.org/10.1007/s00253-010-2752-7 DO - 10.1007/s00253-010-2752-7 ID - Suwannarangsee2010 ER - TY - JOUR AU - Kasprzak, J. AU - Rauter, M. AU - Worch, S. AU - Riechen, J. AU - Baronian, K. AU - Bode, R. AU - Schauer, F. AU - Kunze, G. PY - 2016 DA - 2016// TI - Characterization of an Arxula adeninivorans alcohol dehydrogenase involved in the metabolism of ethanol and 1-butanol JO - FEMS Yeast Res VL - 16 UR - https://doi.org/10.1093/femsyr/fow018 DO - 10.1093/femsyr/fow018 ID - Kasprzak2016 ER - TY - JOUR AU - Steinborn, G. AU - Gellissen, G. AU - Kunze, G. PY - 2007 DA - 2007// TI - A novel vector element providing multicopy vector integration in Arxula adeninivorans JO - FEMS Yeast Res VL - 7 UR - https://doi.org/10.1111/j.1567-1364.2007.00280.x DO - 10.1111/j.1567-1364.2007.00280.x ID - Steinborn2007 ER - TY - JOUR AU - Kunze, G. AU - Kunze, I. PY - 1994 DA - 1994// TI - Characterization of Arxula adeninivorans strains from different habitats JO - Antonie Van Leeuwenhoek VL - 65 UR - https://doi.org/10.1007/BF00878276 DO - 10.1007/BF00878276 ID - Kunze1994 ER - TY - JOUR AU - Tanaka, A. AU - Ohnishi, N. AU - Fukui, S. PY - 1967 DA - 1967// TI - Studies on the formation of vitamins and their function in hydrocarbon fermentation. Production of vitamins and their function in hydrocarbon medium JO - J Ferment Technol VL - 45 ID - Tanaka1967 ER - TY - BOOK AU - Rose, M. D. AU - Winston, F. AU - Hieter, P. PY - 1990 DA - 1990// TI - Methods in yeast genetics. A laboratory manual PB - Cold Spring Harbor Laboratory CY - Cold Spring Harbor ID - Rose1990 ER - TY - JOUR AU - Hanahan, D. PY - 1983 DA - 1983// TI - Studies on transformation of Escherichia coli with plasmids JO - J Mol Biol VL - 166 UR - https://doi.org/10.1016/S0022-2836(83)80284-8 DO - 10.1016/S0022-2836(83)80284-8 ID - Hanahan1983 ER - TY - JOUR AU - Böer, E. AU - Bode, R. AU - Mock, H. P. AU - Piontek, M. AU - Kunze, G. PY - 2009 DA - 2009// TI - Atan1p-an extracellular tannase from the dimorphic yeast Arxula adeninivorans: molecular cloning of the ATAN1 gene and characterization of the recombinant enzyme JO - Yeast VL - 26 UR - https://doi.org/10.1002/yea.1669 DO - 10.1002/yea.1669 ID - Böer2009 ER - TY - JOUR AU - Wartmann, T. AU - Böer, E. AU - Pico, A. H. AU - Sieber, H. AU - Bartelsen, O. AU - Gellissen, G. AU - Kunze, G. PY - 2002 DA - 2002// TI - High-level production and secretion of recombinant proteins by the dimorphic yeast Arxula adeninivorans JO - FEMS Yeast Res VL - 2 ID - Wartmann2002 ER - TY - JOUR AU - Böer, E. AU - Piontek, M. AU - Kunze, G. PY - 2009 DA - 2009// TI - Xplor 2–an optimized transformation/expression system for recombinant protein production in the yeast Arxula adeninivorans JO - Appl Microbiol Biotechnol VL - 84 UR - https://doi.org/10.1007/s00253-009-2167-5 DO - 10.1007/s00253-009-2167-5 ID - Böer2009 ER - TY - JOUR AU - Klabunde, J. AU - Kunze, G. AU - Gellissen, G. AU - Hollenberg, C. P. PY - 2003 DA - 2003// TI - Integration of heterologous genes in several yeast species using vectors containing a Hansenula polymorpha-derived rDNA-targeting element JO - FEMS Yeast Res VL - 4 UR - https://doi.org/10.1016/S1567-1356(03)00148-X DO - 10.1016/S1567-1356(03)00148-X ID - Klabunde2003 ER - TY - JOUR AU - Kunze, I. AU - Nilsson, C. AU - Adler, K. AU - Manteuffel, R. AU - Horstmann, C. AU - Bröker, M. AU - Kunze, G. PY - 1998 DA - 1998// TI - Correct targeting of a vacuolar tobacco chitinase in Saccharomyces cerevisiae–post-translational modifications are dependent on the host strain JO - Biochim Biophys Acta VL - 1395 UR - https://doi.org/10.1016/S0167-4781(97)00163-2 DO - 10.1016/S0167-4781(97)00163-2 ID - Kunze1998 ER - TY - JOUR AU - Bradford, M. PY - 1976 DA - 1976// TI - A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding JO - Anal Biochem VL - 72 UR - https://doi.org/10.1016/0003-2697(76)90527-3 DO - 10.1016/0003-2697(76)90527-3 ID - Bradford1976 ER - TY - JOUR AU - Huisinga, K. L. AU - Pugh, B. F. PY - 2004 DA - 2004// TI - A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae JO - Mol Cell VL - 13 UR - https://doi.org/10.1016/S1097-2765(04)00087-5 DO - 10.1016/S1097-2765(04)00087-5 ID - Huisinga2004 ER - TY - JOUR AU - Teste, M. A. AU - Duquenne, M. AU - François, J. M. AU - Parrou, J. L. PY - 2009 DA - 2009// TI - Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae JO - BMC Mol Biol VL - 10 UR - https://doi.org/10.1186/1471-2199-10-99 DO - 10.1186/1471-2199-10-99 ID - Teste2009 ER - TY - JOUR AU - Livak, K. J. AU - Schmittgen, T. D. PY - 2001 DA - 2001// TI - Analysis of relative gene expression data using real-time quantitative PCR and the 2[-delta delta C(T)] method JO - Methods VL - 25 UR - https://doi.org/10.1006/meth.2001.1262 DO - 10.1006/meth.2001.1262 ID - Livak2001 ER - TY - CHAP AU - Smyth, G. K. ED - Gentleman, R. ED - Carey, V. ED - Dudoit, S. I. ED - Huber, W. PY - 2005 DA - 2005// TI - Limma: linear models for microarry data BT - Bioinformatics and computational biology solutions using R and bioconductor PB - Springer CY - New York UR - https://doi.org/10.1007/0-387-29362-0_23 DO - 10.1007/0-387-29362-0_23 ID - Smyth2005 ER - TY - JOUR AU - Smyth, G. K. PY - 2004 DA - 2004// TI - Linear models and empirical Bayes methods for assessing differential expression in microarray experiments JO - Stat Appl Genet Mol Biol VL - 3 ID - Smyth2004 ER -