Table 3 Mutations present in the carotenogenic mutants
Strain | Mutation | ID | Gene |
|---|---|---|---|
R7B | Scaffold 2: 2919466 Scaffold 4: 538767 Scaffold 11: 599712 Scaffold 6: 2888792 | 33992 162470 86468 165433 | 3-isopropylmalate dehydratase E3 ubiquitin ligase Helicase 2 DUF1688 |
MU206 | Scaffold 2: 3372803 | 107362 | Predicted protein |
MU216 | Many | Many | Many |
MU217 | Scaffold 1: 2734563 Scaffold 1: 3851481 Scaffold 1: 5070681 Scaffold 1: 5222094 Scaffold 1: 5816574 Scaffold 2: 2533223 Scaffold 3: 2140181 Scaffold 3: 2748240 Scaffold 4: 2327078 Scaffold 4: 2465882 Scaffold 5: 541005 Scaffold 5: 2147324 Scaffold 6: 389132 Scaffold 6: 2797394 Scaffold 7: 408056 Scaffold 8: 1129513 Scaffold 11: 585629 | 105120 158722 31540 105956 176325 160164 161513 155773 156146 81849 162471 129474 164712 112987 180434 157185 150394 | Cdc4 and related F-box and WD-40 proteins Similar to dentin sialophosphoprotein Hypothetical protein (WD40 domain) Hypothetical protein (PX domain) Type IA hybrid histidine kinase Predicted protein DEAD/DEAH box DNA helicase (Mer3) Phytochelatin synthase Putative DNA-binding protein Predicted protein Serine/threonine protein kinase Transcription factor Chromodomain helicase DNA binding protein DNA excision repair protein (Rad5) Glutamine-fructose-6-phosphate transaminase Autophagic serine protease Alp2 Exocyst comlex component Sec10 |
MU218 | Scaffold 1: 1190571 Scaffold 1: 3673453 Scaffold 1: 4109183 Scaffold 2: 460034 Scaffold 2: 46601146 Scaffold 3: 1851291 Scaffold 3: 4242409, 4243539 Scaffold 4: 580831 Scaffold 4: 647221 Scaffold 4: 3597815 Scaffold 5: 2893384 Scaffold 6: 218062 Scaffold 6: 835657 Scaffold 6: 2366334 Scaffold 7: 1528520 Scaffold 7: 2134543 Scaffold 8: 1828638 Scaffold 9: 869061 Scaffold 9: 965023 Scaffold 10: 586865 | 136827 158673 76500 155155 107817 108531 162134 162480 80915 143638 82957 75161 112339 41089 119794 75421 148442 167359 85497 115432 | Mitocondrial carrier protein Nuclear distribution protein NUDC Related to plant expansions Amido phosphoribosyltransferase E3 Ring finger ubiquitin ligase Phospholipid/glycerol acyltransferase E3 Ubiquitin ligase (HECT) Basic-leucine zipper (bZIP) transcription factor Predicted protein DnaJ domain protein WD repeat-containing protein Golgi SNAP receptor complex member Thioesterase/thiol ester dehydrase-isomerase Sec5 subunit of exocyst complex Kinesin like protein Iron/zinc ion transporter Translation elongation factor EF1B Predicted protein Zinc finger, PHD-type Hypothetical protein |
MU264 | Scaffold 1: 1206002 Scaffold 4: deletion 1887965–1893565 Scaffold 6: 2888792 Scaffold 7: 2443177 | 104636 81312 165433 166227 | Septin family protein Adenylyl cyclase class 3–4/guanylyl cyclase DUF1688 F-box protein containing LRR |
MU286 | Scaffold 5: 2245854 Scaffold 1: deletion 635987–635988 Scaffold 3: deletion 4425722–4425732 Scaffold 5: 2245854 Scaffold 6: 2888792 | 111734 157796 116964 111734 165433 | Lipase class 3 Vacuolar sorting protein VPS1 Autophagy-related protein 9 Lipase class 3 DUF1688 |