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Table 6 Total numbers of MHC class II epitope prediction from target proteins

From: Putative virulence factors of Corynebacterium pseudotuberculosis FRC41: vaccine potential and protein expression

Target protein

Mouse MHC HLA allele

Number of strong bindersa

Number of weak bindersa

Number of peptidesb

PknG

H-2-IAb

9

35

735

SpaC

H-2-IAb

4

48

782

SodC

H-2-IAb

0

12

192

NanH

H-2-IAb

22

64

680

PknG

H-2-IAd

0

29

735

SpaC

H-2-IAd

0

13

782

SodC

H-2-IAd

2

6

192

NanH

H-2-IAd

0

32

680

  1. See epitope sequences in Additional file 4
  2. a Strong binder threshold 50.00. Weak binder threshold 500.00
  3. b Peptide length 15 mer