Putative virulence factors of Corynebacterium pseudotuberculosis FRC41: vaccine potential and protein expression

Table 5 MHC class I epitopes predicted from target proteins

Target Protein	Mouse HLA Allele	Epitope number	Start	End	Peptide (9 mer)	Consensus rank (%)
SpaC	H-2-Db	1	615	623	FGLFNSAKL	0.3
SpaC	H-2-Kk	2	34	42	EEFENTEPI	0.3
SpaC	H-2-Kb	3	90	98	QSFNRNTGL	0.35
SpaC	H-2-Kd	4	124	132	IYAISQGRL	0.4
SpaC	H-2-Kd	5	116	124	AYNPKEGYI	0.5
SpaC	H-2-Kd	6	199	207	RYLVSNSSQ	0.5
SpaC	H-2-Kd	7	771	779	IYLVMGVLL	0.5
SpaC	H-2-Db	8	450	458	KCLQNTASI	0.6
SpaC	H-2-Db	9	208	216	SGTHNLYTL	0.7
SpaC	H-2-Dd	10	48	56	VGPSVDPTV	0.7
SpaC	H-2-Kd	11	458	466	IYANEKDLI	0.8
SpaC	H-2-Kb	12	785	793	SWSLYRNQL	0.85
SpaC	H-2-Kb	13	774	782	VMGVLLVLV	0.95
NanH	H-2-Kk	1	44	52	SEFFDSKVI	0.3
NanH	H-2-Dd	2	39	47	PDPVTSEFF	0.4
NanH	H-2-Dd	3	55	63	VDPAGQRCF	0.4
NanH	H-2-Kk	4	634	642	QELLRIFPG	0.5
NanH	H-2-Dd	5	655	663	GGMQKLLAF	0.6
NanH	H-2-Kb	6	645	653	PIFSFLASI	0.8
PknG	H-2-Kd	1	437	445	SYAEPSQTL	0.2
PknG	H-2-Kk	2	455	463	EEFANSKEI	0.2
PknG	H-2-Db	3	678	686	IAIMNAALT	0.5
PknG	H-2-Ld	4	525	533	LPGEAAPKL	0.5
PknG	H-2-Kb	5	586	594	KALYLYALV	0.55
PknG	H-2-Dd	6	665	673	SIPTNEPRF	0.6
PknG	H-2-Kb	7	685	693	LTWLRQSRL	0.6
PknG	H-2-Db	8	504	512	TSLFLDDYV	0.7
PknG	H-2-Kd	9	379	387	LYSPQRSTF	0.8
PknG	H-2-Kb	10	632	640	STHRRMAEL	0.85
PknG	H-2-Db	11	457	465	FANSKEIPL	0.9
PknG	H-2-Kk	12	21	29	EEDDLSGLL	0.9
PknG	H-2-Kk	13	353	361	LETQLFGIL	0.9

ISSN: 1475-2859