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Table 4 B-cell epitopes predicted from target proteins

From: Putative virulence factors of Corynebacterium pseudotuberculosis FRC41: vaccine potential and protein expression

Target Protein

Epitope number

B-cell epitopesa

SpaC

1

1-MEVPEKTKVEIRFQTGSKISTPSTPSV-27

SpaC

2

70-SQHTNRGETFNDRNSTDLYVQ-90

SpaC

3

116-AYNPKEGYIYAISQGRLKTLQSSKLRIYDEDPNYPAGHLL-155

SpaC

4

234-NDYTSTGKTDSNYVWGI-250

SpaC

5

251-KNSSNPAVLERIDVRDGSRKEFSLDGVKDPLGQNVEKGIYGT-292

SpaC

6

331-IVAKRKGPTSQNNDATSNG-349

SpaC

7

434-KATYKVTANQSISNNEKCLQNTASIYAN-461

SpaC

8

504-GNGLRKVTYKIEVKNPKGFPETKYSLTDTPQFADSV-539

SpaC

9

540-KLERLKVISDYGKKNQEVQAADISV-564

SpaC

10

615-FGLFNSAKLKVGVSEKTSEGCAPIVR-640

SpaC

11

647-QLKKVDAENKETELQATFE-665

SpaC

12

735-PLSKSADQGKDPNLVIL-751

SpaC

13

756-VRVGTLPKTGGHGVAIYLV-774

SodC

1

26-SSSTTTKDSADKAMTS-41

NanH

1

1-MTDSHRRGTRKALVTLTA-18

NanH

2

65-GEGKLPDPVTSEFF-78

NanH

3

520-IEDAKAATAKAEEATAN-536

NanH

4

559-AEAKSAAQDAI-569

NanH

5

595-KAENEAKALAE-605

NanH

6

617-SQDQAKALAEA-627

NanH

7

645-EKEKSGKAGGTDNTENKGFWQE-666

PknG

1

1- MNDPLSRGTEAIPFDPFADDEEDDLSGLLND-31

PknG

1.1

38-DTDTDARSREKSISTFRSRRGTNRDDRTVANG-69

PknG

1.2

79-STAEEMLKDDAYIEQKGLEKPLLHPGD-105

PknG

2

381-SPQRSTFGTKHMVFRTDQLIDGIERNVRITSEEVNA-416

PknG

3

438-YAEPSQTLQTLRDAMAQEEFANSKEIPL-465

PknG

4

479-EARSWLDTLDATLSDDWRHQWYSGVTS-505

PknG

5

576-LTKDPETLRFKALYL-590

PknG

6

627-QVPQNSTHRRMAELTAI-643

PknG

7

651-LSESRIRRAARRLESIPTNEPRFLQIKIA-679

PknG

8

718-DSLRLLARSAPNVHHRYTLV-737

  1. a Epitopes in signal peptide and conserved domains were discarded