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Table 6 The sRNA candidates related with genes for sterol catabolism

From: RNA-Seq analysis uncovers non-coding small RNA system of Mycobacterium neoaurum in the metabolism of sterols to accumulate steroid intermediates

Mn-CC/C Mn-9OHAD/CC Mn-ADD/CC Mn-BNA/CC
Gene SRNA ID Gene SRNA ID Gene SRNA ID Gene SRNA ID
yrb4A 234 mce4A 109, 209, 205 mce4A 109, 209 yrb4A 55, 225, 198, 14, 169, 209, 148
mce4A 134 mce4B 39 mce4B 235, 39 yrb4B 90
mce4C 253 mce4C 167 mce4C 167, 208 mce4A 209, 205
mce4F 188 mce4D 39, 116, 167, 215, 209 mce4D 39, 167, 215, 209 mce4B 235
kshB 188, 20 mce4E 102 mce4E 119 mce4D 116, 215, 209
hsaD 79 mce4F 226, 10 mce4F 119 mce4E 102
hsaC 206 hsaF 217 kshA 146 mce4F 226, 10
ltp3 138 cyp142 231, 126 ltp3 181 cyp142 42, 61
fadD17 49, 129 aspB 168 ltp4 225 cyp125 34
fadE34 137, 206 hsd4B 222, 79 echA19 235 kshA 180
fadE26 138, 20 kstR2 17 fadD17 97, 164 hsaB 116, 153
fadE27 138 fadE32 138, 66, 146 ltp2 195
fadE28 49, 60 fadE28 41, 126, 8, 190, 14, 97, 67, 60 ltp4 225
fadE29 129 rv3542c 210 echA19 235
fadE30 23 rv3541c 210 fadD17 49, 97, 164, 145
fadA6 43, 63 hsd4A 180
fadA5 131, 79 fadE28 41, 49, 1, 8, 190, 14, 97, 67, 60
hsd4B 79 fadE32 138
kstR2 17 rv3542c 34, 210
rv3541c 210