RNA-Seq analysis uncovers non-coding small RNA system of Mycobacterium neoaurum in the metabolism of sterols to accumulate steroid intermediates

Table 5 Representation of the most abundant downregulated sRNAs in regulatory networks of Mn-9OHAD/CC, Mn-ADD/CC, and Mn-BNA/CC

SRNA ID	Mn-9OHAD/CC		Mn-ADD/CC		Mn-BNA/CC
SRNA ID	Fold change^a	Num^b	Fold change	Num	Fold change	Num
225	0	57	0.17	50	0.40	48
209	0.06	64	0.08	43	0.20	48
122	0.42	30	0.25	24	0.17	34
210	0.47	38	0.07	34	0.23	40
174	0.24	18	0.13	9	0.20	16
166	0.24	21	0.20	17	0.42	17
152	0.22	31	0.49	26	0.16	29
246	0.21	1	0.21	2	0.31	1
164	0.26	16	0.21	14	0.21	15
170	0.19	12	0.44	3	0.36	5
70	0.44	27	0.26	25	0.22	23
67	0.23	11	0.30	8	0.40	7
97	0.46	16	0.30	18	0.24	21
89	0.45	7	0.26	7	0.24	11
121	0.19	6	0.38	6	0.10	8
181	0.33	36	0.38	29	NF	NF
3	NF^c	NF	0.33	35	0.41	44
10	0.08	65	NF	NF	0.48	52
64	NF	NF	0.31	35	0.33	39
182	0.31	24	0.41	15	NF	NF
126	0.29	43	0.44	31	NF	NF
167	0.42	20	0.14	18	NF	NF
101	0.38	28	0.13	17	NF	NF
116	0.15	28	NF	NF	0.33	22

^a The RPKM ratio of sRNA candidate expressed in the form of Mn-9OHAD/CC, Mn-ADD/CC, and Mn-BNA/CC
^b Number of genes regulated by sRNA candidates
^c Not found

ISSN: 1475-2859